Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 MIR548X2-201ENST00000579776 100 ntBASIC1.06□□□□□ -2.24
PCDH12Q9NPG4 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
PCDH12Q9NPG4 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
PCDH12Q9NPG4 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDH12Q9NPG4 SNORD115-2-201ENST00000362842 82 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 SNORD115-20-201ENST00000365099 82 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.398-201ENST00000383952 99 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.464-201ENST00000384282 110 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 AC015818.7-201ENST00000428754 109 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 AC087499.7-201ENST00000441958 109 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 RNA5SP33-201ENST00000516687 98 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 MIR4452-201ENST00000583004 71 ntBASIC1.04□□□□□ -2.24
PCDH12Q9NPG4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 RNU7-164P-201ENST00000459221 62 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.03□□□□□ -2.24
PCDH12Q9NPG4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 RNU6-309P-201ENST00000364573 106 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 RNU6-949P-201ENST00000384040 107 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 RNU7-197P-201ENST00000458836 62 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 SNORA25.12-201ENST00000516202 82 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 MIR4653-201ENST00000585107 83 ntBASIC1.02□□□□□ -2.25
PCDH12Q9NPG4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 RNU6-915P-201ENST00000364943 103 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 AP001328.1-201ENST00000528550 176 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 AC004812.1-201ENST00000540773 146 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 SNORD92-201ENST00000585078 85 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.215-201ENST00000364204 112 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.651-201ENST00000459380 103 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 MIR6734-201ENST00000621166 68 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 AP001340.1-201ENST00000624405 217 ntBASIC1□□□□□ -2.25
PCDH12Q9NPG4 RNY1P11-201ENST00000363759 113 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 MIR605-201ENST00000385078 83 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RNU6-460P-201ENST00000391158 108 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 AC244098.3-201ENST00000424803 96 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RNU7-102P-201ENST00000458948 62 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RNU7-79P-201ENST00000516082 62 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RNU7-35P-201ENST00000517174 62 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 AL137067.1-201ENST00000615933 120 ntBASIC0.99□□□□□ -2.25
PCDH12Q9NPG4 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
PCDH12Q9NPG4 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
PCDH12Q9NPG4 AL512326.2-201ENST00000426359 151 ntBASIC0.98□□□□□ -2.25
PCDH12Q9NPG4 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
PCDH12Q9NPG4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PCDH12Q9NPG4 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.97□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.97□□□□□ -2.25
PCDH12Q9NPG4 U8.15-201ENST00000390947 134 ntBASIC0.97□□□□□ -2.25
PCDH12Q9NPG4 RNU2-35P-201ENST00000516446 142 ntBASIC0.97□□□□□ -2.25
PCDH12Q9NPG4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 RNA5SP222-201ENST00000411039 105 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 RNU6-1212P-201ENST00000517023 104 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 AC090897.1-201ENST00000580909 226 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 MIR7111-201ENST00000619751 72 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 AC021753.1-201ENST00000635724 168 ntBASIC0.96□□□□□ -2.26
PCDH12Q9NPG4 RNU6-403P-201ENST00000363163 104 ntBASIC0.95□□□□□ -2.26
PCDH12Q9NPG4 RNU7-123P-201ENST00000515911 60 ntBASIC0.95□□□□□ -2.26
PCDH12Q9NPG4 MIR3121-201ENST00000579680 77 ntBASIC0.95□□□□□ -2.26
PCDH12Q9NPG4 RNU6-647P-201ENST00000364243 107 ntBASIC0.94□□□□□ -2.26
PCDH12Q9NPG4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.94□□□□□ -2.26
PCDH12Q9NPG4 SNORA32-201ENST00000384072 121 ntBASIC0.94□□□□□ -2.26
PCDH12Q9NPG4 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
PCDH12Q9NPG4 MIR548AE2-201ENST00000583456 67 ntBASIC0.94□□□□□ -2.26
PCDH12Q9NPG4 Y_RNA.343-201ENST00000365354 112 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 MIR520E-201ENST00000384867 87 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 SNORD77B-201ENST00000391112 67 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 RNU4-69P-201ENST00000410677 143 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 MTND5P41-201ENST00000517498 206 ntBASIC0.93□□□□□ -2.26
PCDH12Q9NPG4 U7.2-201ENST00000607576 63 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms