Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MIR4303-201ENST00000581299 66 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 MIR4777-201ENST00000583710 86 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.97□□□□□ -2.09
BCAS3Q9H6U6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 RNU6-60P-201ENST00000364792 103 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 Y_RNA.388-201ENST00000383919 113 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 RNU7-2P-201ENST00000516096 62 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1006P-201ENST00000516998 103 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
BCAS3Q9H6U6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 MIR450A2-201ENST00000385022 100 ntBASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 AL451046.2-201ENST00000403074 277 ntBASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
BCAS3Q9H6U6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 SNORA32-201ENST00000384072 121 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 RNU6-342P-201ENST00000384521 104 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1152P-201ENST00000384576 107 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 MIR489-201ENST00000384923 84 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 AC245047.7-201ENST00000440265 293 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 RNU7-61P-201ENST00000515897 61 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 RNU6-795P-201ENST00000516323 103 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 MIR548AO-201ENST00000579992 96 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 AC096720.1-201ENST00000604441 183 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 AC062037.1-201ENST00000605302 128 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 MIR4251-201ENST00000635819 61 ntBASIC1.94□□□□□ -2.1
BCAS3Q9H6U6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 SNORD114-10-201ENST00000363409 72 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNA5SP48-201ENST00000363969 126 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-644P-201ENST00000391155 98 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-447P-201ENST00000410293 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-355P-201ENST00000410427 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-791P-201ENST00000410467 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-705P-201ENST00000410601 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-860P-201ENST00000410860 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RNU6-785P-201ENST00000411324 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 AP1B1P2-201ENST00000416196 106 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 MRPL35P3-201ENST00000421557 364 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 RN7SKP12-201ENST00000516275 143 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 CYP3A52P-201ENST00000563326 91 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 AC015688.6-201ENST00000577737 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 SNORA77B-201ENST00000578179 125 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 U6.90-201ENST00000614007 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 U6.70-201ENST00000620287 104 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 AC091304.10-201ENST00000641554 121 ntBASIC1.93□□□□□ -2.1
BCAS3Q9H6U6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 MIR206-201ENST00000384872 86 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 SNORD41-201ENST00000386967 70 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 RNU6-972P-201ENST00000391208 107 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 RNU7-41P-201ENST00000515917 61 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 U7.3-201ENST00000616123 62 ntBASIC1.92□□□□□ -2.1
BCAS3Q9H6U6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 SNORD38.1-201ENST00000363863 68 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 SNORD38B-201ENST00000384690 67 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 AC090844.1-201ENST00000422019 156 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 UBL5P1-201ENST00000507979 193 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 RNU7-79P-201ENST00000516082 62 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 AL357312.1-201ENST00000603879 298 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 SNORD38B-202ENST00000625943 69 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 AL512310.12-203ENST00000640543 90 ntBASIC1.91□□□□□ -2.1
BCAS3Q9H6U6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
BCAS3Q9H6U6 RNU6-887P-201ENST00000410660 100 ntBASIC1.9□□□□□ -2.11
BCAS3Q9H6U6 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
BCAS3Q9H6U6 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
BCAS3Q9H6U6 RNU7-137P-201ENST00000516788 62 ntBASIC1.9□□□□□ -2.11
BCAS3Q9H6U6 MIR548Z-201ENST00000584743 97 ntBASIC1.9□□□□□ -2.11
BCAS3Q9H6U6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.593-201ENST00000410292 98 ntBASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 SNORD67.1-201ENST00000516618 108 ntBASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
BCAS3Q9H6U6 RNU6-675P-201ENST00000384236 104 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms