Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNY1P11-201ENST00000363759 113 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 Y_RNA.274-201ENST00000364714 101 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 RNU6-893P-201ENST00000458841 100 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 AL662814.1-201ENST00000617364 121 ntBASIC0.42□□□□□ -2.34
NXF3Q9H4D5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
NXF3Q9H4D5 SNORA22.1-201ENST00000362701 134 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-1082P-201ENST00000364574 107 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-364P-201ENST00000384387 107 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-768P-201ENST00000384683 107 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 SNORD100-201ENST00000408573 76 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-447P-201ENST00000410293 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-355P-201ENST00000410427 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-791P-201ENST00000410467 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-705P-201ENST00000410601 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-860P-201ENST00000410860 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU6-785P-201ENST00000411324 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU7-102P-201ENST00000458948 62 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 RNU7-156P-201ENST00000517214 74 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 U6.90-201ENST00000614007 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 U6.70-201ENST00000620287 104 ntBASIC0.41□□□□□ -2.34
NXF3Q9H4D5 MIR18A-201ENST00000362310 71 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 RNU6-508P-201ENST00000363231 103 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.233-201ENST00000364407 101 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.515-201ENST00000384535 112 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.521-201ENST00000384560 114 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 AC107027.2-201ENST00000512197 115 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 AC141273.2-201ENST00000618989 130 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 AC078938.1-201ENST00000620993 318 ntBASIC0.4□□□□□ -2.35
NXF3Q9H4D5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.337-201ENST00000365312 102 ntBASIC0.39□□□□□ -2.35
NXF3Q9H4D5 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
NXF3Q9H4D5 MT-TG-201ENST00000387429 68 ntBASIC0.39□□□□□ -2.35
NXF3Q9H4D5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.39□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.188-201ENST00000363952 111 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.401-201ENST00000383965 117 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 RNY1P6-201ENST00000384193 109 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 U8.15-201ENST00000390947 134 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 SNORD93-201ENST00000408813 74 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 AC096949.1-201ENST00000412047 152 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 RNA5SP236-201ENST00000516169 116 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 AC141846.1-201ENST00000568348 142 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 AC072026.1-201ENST00000605023 201 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 MIR3658-201ENST00000636291 56 ntBASIC0.38□□□□□ -2.35
NXF3Q9H4D5 RNU6-349P-201ENST00000362402 107 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-379P-201ENST00000363813 104 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-949P-201ENST00000384040 107 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 SNORA18-201ENST00000384416 132 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 SNORA75.5-201ENST00000391291 81 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.644-201ENST00000459006 113 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.674-201ENST00000516362 113 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-388P-201ENST00000517012 105 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-389P-201ENST00000517048 105 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-1271P-201ENST00000517049 105 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 RNU6-448P-201ENST00000517052 107 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 MIR3646-201ENST00000578301 84 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 MIR8066-201ENST00000617280 78 ntBASIC0.37□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 RNU6-818P-201ENST00000364837 108 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.297-201ENST00000364950 91 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 RNU6-588P-201ENST00000410281 105 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 RNA5SP144-201ENST00000410846 116 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 RNU4-83P-201ENST00000410863 133 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
NXF3Q9H4D5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.36□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU6-403P-201ENST00000363163 104 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU4-84P-201ENST00000364200 139 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU6-239P-201ENST00000390990 99 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU7-121P-201ENST00000516604 62 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU6-765P-201ENST00000516916 99 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 RNU2-60P-201ENST00000517290 128 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 AC011603.4-201ENST00000611325 277 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms