Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NBPF3Q9H094 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.23□□□□□ -1.89
NBPF3Q9H094 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
NBPF3Q9H094 RNU6-859P-201ENST00000362728 107 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 Y_RNA.119-201ENST00000363301 96 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 RNU6-243P-201ENST00000391140 107 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 RNU6-466P-201ENST00000391224 103 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 RNU6-1254P-201ENST00000391266 104 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 MIR942-201ENST00000401111 86 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.23□□□□□ -1.89
NBPF3Q9H094 AC092628.1-201ENST00000436250 252 ntBASIC3.23□□□□□ -1.89
NBPF3Q9H094 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.23□□□□□ -1.89
NBPF3Q9H094 U8.2-201ENST00000363156 134 ntBASIC3.22□□□□□ -1.89
NBPF3Q9H094 MIR9-1-201ENST00000385198 89 ntBASIC3.22□□□□□ -1.89
NBPF3Q9H094 AC244636.1-201ENST00000421152 228 ntBASIC3.22□□□□□ -1.89
NBPF3Q9H094 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NBPF3Q9H094 AL161431.1-201ENST00000618966 4205 ntBASIC3.21□□□□□ -1.89
NBPF3Q9H094 MIR26A1-201ENST00000362205 77 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 MIR337-201ENST00000362281 93 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 RNA5SP68-201ENST00000363885 119 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 MIR520C-201ENST00000385005 87 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 HMGN2P39-201ENST00000398005 273 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 RNU2-7P-201ENST00000410794 178 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
NBPF3Q9H094 AC011753.1-201ENST00000451001 220 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 snoU13.15-201ENST00000459407 104 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 MIR4709-201ENST00000577272 72 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.21□□□□□ -1.9
NBPF3Q9H094 MIR4251-201ENST00000635819 61 ntBASIC3.21□□□□□ -1.9
NBPF3Q9H094 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NBPF3Q9H094 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
NBPF3Q9H094 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
NBPF3Q9H094 SNORA25.4-201ENST00000363666 124 ntBASIC3.2□□□□□ -1.9
NBPF3Q9H094 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.2□□□□□ -1.9
NBPF3Q9H094 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
NBPF3Q9H094 MIR6817-201ENST00000615588 66 ntBASIC3.2□□□□□ -1.9
NBPF3Q9H094 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.2□□□□□ -1.9
NBPF3Q9H094 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NBPF3Q9H094 RNU6-957P-201ENST00000363652 99 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 Y_RNA.371-201ENST00000365591 113 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 Y_RNA.443-201ENST00000384135 111 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 SNORD45A-201ENST00000384512 84 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 SNORA67.4-201ENST00000384688 142 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 MIR518E-201ENST00000385252 88 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 RNU6-205P-201ENST00000390858 107 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 FO624990.1-201ENST00000636373 85 ntBASIC3.19□□□□□ -1.9
NBPF3Q9H094 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NBPF3Q9H094 RNU6-895P-201ENST00000384125 103 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 RNU6-291P-201ENST00000384720 107 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 SUMO1P4-201ENST00000429430 302 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 AC245517.4-201ENST00000448601 281 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 RNVU1-2-201ENST00000516326 135 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 SUB1P4-201ENST00000566062 339 ntBASIC3.18□□□□□ -1.9
NBPF3Q9H094 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NBPF3Q9H094 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.17□□□□□ -1.9
NBPF3Q9H094 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NBPF3Q9H094 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NBPF3Q9H094 MIR29C-201ENST00000385231 88 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 AC104389.3-201ENST00000445629 235 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 RNU7-106P-201ENST00000459514 67 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 SNORA31.15-201ENST00000516771 132 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 MIR3935-201ENST00000583472 104 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 ZNF209P-201ENST00000593450 2304 ntBASIC3.17□□□□□ -1.9
NBPF3Q9H094 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.16□□□□□ -1.9
NBPF3Q9H094 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NBPF3Q9H094 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NBPF3Q9H094 RNA5SP393-201ENST00000363423 117 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 RNU6-614P-201ENST00000384369 107 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 MIR633-201ENST00000384821 98 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 MIR520A-201ENST00000384862 85 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 RNU11-3P-201ENST00000391111 133 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 RNU7-41P-201ENST00000515917 61 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 RNA5SP148-201ENST00000516527 94 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 U6.59-201ENST00000615686 107 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 U4.3-201ENST00000621047 82 ntBASIC3.16□□□□□ -1.9
NBPF3Q9H094 ZNF658B-202ENST00000615961 3375 ntBASIC3.15□□□□□ -1.9
NBPF3Q9H094 RNU6-340P-201ENST00000364005 107 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 RNU1-138P-201ENST00000384093 164 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 SNORA3.2-201ENST00000408221 125 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 AC244023.1-201ENST00000426884 112 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 MIR2113-201ENST00000459007 91 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 snoU13.2-201ENST00000459201 104 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 snoU13.27-201ENST00000459278 104 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 AC242498.1-201ENST00000604134 111 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 AL049779.4-201ENST00000604500 156 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 AC010297.1-201ENST00000623948 149 ntBASIC3.15□□□□□ -1.91
NBPF3Q9H094 MIR424-201ENST00000362227 98 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 RNU6-681P-201ENST00000364012 104 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 Y_RNA.207-201ENST00000364142 106 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 RNU6-1051P-201ENST00000365471 102 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 AC009474.2-201ENST00000451383 136 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 MIR5194-201ENST00000582634 120 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 MIR4635-201ENST00000583759 79 ntBASIC3.14□□□□□ -1.91
NBPF3Q9H094 AL096861.1-201ENST00000610899 123 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms