Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.398-201ENST00000383952 99 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 SNORA18-201ENST00000384416 132 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 MIR125B2-201ENST00000385128 89 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 RNA5SP247-201ENST00000411181 105 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 RNU7-56P-201ENST00000458744 62 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 AC141846.1-201ENST00000568348 142 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 AP001340.1-201ENST00000624405 217 ntBASIC0.62□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.8-201ENST00000362353 102 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-309P-201ENST00000364573 106 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-949P-201ENST00000384040 107 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RPL39P25-201ENST00000449384 154 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-240P-201ENST00000516098 97 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.686-201ENST00000516548 134 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 AC021443.1-201ENST00000604478 211 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
CCDC28BQ9BUN5 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.215-201ENST00000364204 112 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 MIR1287-201ENST00000408492 90 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 MIR1276-201ENST00000408707 83 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.226-201ENST00000364337 114 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-915P-201ENST00000364943 103 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-364P-201ENST00000384387 107 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-342P-201ENST00000384521 104 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU6-907P-201ENST00000390924 102 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU7-164P-201ENST00000459221 62 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNU2-35P-201ENST00000516446 142 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNA5SP33-201ENST00000516687 98 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 MIR3121-201ENST00000579680 77 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 MIR4452-201ENST00000583004 71 ntBASIC0.59□□□□□ -2.31
CCDC28BQ9BUN5 RNY1P13-201ENST00000365030 105 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 RNU6-460P-201ENST00000391158 108 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 SNORD93-201ENST00000408813 74 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AL512326.2-201ENST00000426359 151 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AC015818.7-201ENST00000428754 109 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AC087499.7-201ENST00000441958 109 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 RNU7-79P-201ENST00000516082 62 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 SNORA25.12-201ENST00000516202 82 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AP001328.1-201ENST00000528550 176 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AL078603.1-201ENST00000603824 313 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AC021753.1-201ENST00000635724 168 ntBASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC28BQ9BUN5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 RNY1P5-201ENST00000383890 115 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 MIR569-201ENST00000385228 96 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 U8.15-201ENST00000390947 134 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 MIR548I1-201ENST00000408810 149 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 RNU7-102P-201ENST00000458948 62 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 RNU7-200P-201ENST00000516105 62 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 MTND5P41-201ENST00000517498 206 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 AC090897.1-201ENST00000580909 226 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 AL137067.1-201ENST00000615933 120 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 MIR6767-201ENST00000637302 66 ntBASIC0.57□□□□□ -2.32
CCDC28BQ9BUN5 RNU6-508P-201ENST00000363231 103 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms