Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC015688.6-201ENST00000577737 104 ntBASIC2.24□□□□□ -2.05
ZKSCAN3Q9BRR0 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
ZKSCAN3Q9BRR0 AC105081.1-201ENST00000617727 106 ntBASIC2.24□□□□□ -2.05
ZKSCAN3Q9BRR0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
ZKSCAN3Q9BRR0 RNU6-1163P-201ENST00000364516 107 ntBASIC2.23□□□□□ -2.05
ZKSCAN3Q9BRR0 RNY1P13-201ENST00000365030 105 ntBASIC2.23□□□□□ -2.05
ZKSCAN3Q9BRR0 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
ZKSCAN3Q9BRR0 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
ZKSCAN3Q9BRR0 AC141846.1-201ENST00000568348 142 ntBASIC2.23□□□□□ -2.05
ZKSCAN3Q9BRR0 Y_RNA.219-201ENST00000364232 113 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 SNORD58A-201ENST00000383875 65 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 RNU6-675P-201ENST00000384236 104 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 U8.13-201ENST00000390842 128 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 MIR548G-201ENST00000408442 89 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 HSPE1P24-201ENST00000450782 238 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 RNU6-250P-201ENST00000516958 103 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 MIR4287-201ENST00000579398 78 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 MIR4713-201ENST00000582691 75 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 RNU6-86P-201ENST00000606534 107 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 AL662814.1-201ENST00000617364 121 ntBASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZKSCAN3Q9BRR0 WWP1P1-201ENST00000466609 2769 ntBASIC2.21□□□□□ -2.05
ZKSCAN3Q9BRR0 RPS29P11-201ENST00000496507 171 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 SNORA77B-201ENST00000578179 125 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR3192-201ENST00000584920 77 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-90P-201ENST00000606352 106 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 AC103810.7-201ENST00000607821 91 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 AL096861.1-201ENST00000610899 123 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR6845-201ENST00000613182 61 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR8074-201ENST00000615081 81 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 AP001362.1-201ENST00000625165 124 ntBASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZKSCAN3Q9BRR0 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 snoU13.2-201ENST00000459201 104 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 AC022137.1-201ENST00000483735 151 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 AC133485.1-201ENST00000567176 124 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 SEPT14P17-201ENST00000617978 177 ntBASIC2.2□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-396P-201ENST00000365369 105 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-1275P-201ENST00000391087 107 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-402P-201ENST00000410678 103 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 AC244023.1-201ENST00000426884 112 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 AC027119.1-201ENST00000440877 241 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 SPINT5P-201ENST00000448174 155 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 RNA5SP445-201ENST00000515889 115 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 AC242498.1-201ENST00000604134 111 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
ZKSCAN3Q9BRR0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-949P-201ENST00000384040 107 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-242P-201ENST00000384359 107 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR583-201ENST00000384846 75 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR764-201ENST00000390811 85 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 RPL39P39-201ENST00000455840 151 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 Y_RNA.685-201ENST00000516532 108 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 AP000942.3-201ENST00000603702 160 ntBASIC2.18□□□□□ -2.06
ZKSCAN3Q9BRR0 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 MTND5P40-201ENST00000559945 246 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR4668-201ENST00000582284 70 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR4264-201ENST00000583520 66 ntBASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ZKSCAN3Q9BRR0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU6-219P-201ENST00000364728 107 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR588-201ENST00000384900 83 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 SNORD78.1-201ENST00000390866 65 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR1302-7-201ENST00000408841 72 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 MIR2115-201ENST00000516657 100 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 AP000753.3-201ENST00000604083 169 ntBASIC2.16□□□□□ -2.06
ZKSCAN3Q9BRR0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 RNY1P2-201ENST00000364820 117 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR563-201ENST00000385080 79 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MT-TN-201ENST00000387400 73 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR4299-201ENST00000577899 72 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR8081-201ENST00000611533 95 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 AC012676.2-201ENST00000619258 186 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR7843-201ENST00000622274 79 ntBASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZKSCAN3Q9BRR0 HSBP1P2-201ENST00000299671 229 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 Y_RNA.73-201ENST00000362910 113 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 SNORA25.3-201ENST00000363205 127 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 Y_RNA.620-201ENST00000411009 88 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms