Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 Y_RNA.283-201ENST00000364798 112 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 RNU6-669P-201ENST00000365575 107 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 Y_RNA.443-201ENST00000384135 111 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 RNU6-154P-201ENST00000384306 106 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 MIR499A-201ENST00000384903 122 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 RNU4-53P-201ENST00000410828 140 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 snoU13.17-201ENST00000458802 104 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 AC138749.4-201ENST00000563970 127 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 MIR4500-201ENST00000579472 76 ntBASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CNTNAP3BQ96NU0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 SNORA46-201ENST00000384762 135 ntBASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 MIR548U-201ENST00000390728 81 ntBASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 AC092628.1-201ENST00000436250 252 ntBASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 CYP3A52P-201ENST00000563326 91 ntBASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CNTNAP3BQ96NU0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 SNORD114-1-201ENST00000362705 72 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 U8.9-201ENST00000365667 134 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 RNU6-949P-201ENST00000384040 107 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 MIR520A-201ENST00000384862 85 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 MIR597-201ENST00000384968 97 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 RNU2-7P-201ENST00000410794 178 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 AC110620.1-201ENST00000416042 228 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 SNORA74.3-201ENST00000517108 154 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 MIR4511-201ENST00000582784 87 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 SNORD92-201ENST00000585078 85 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 AL662814.1-201ENST00000617364 121 ntBASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.73□□□□□ -1.97
CNTNAP3BQ96NU0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 RNU6-291P-201ENST00000384720 107 ntBASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 MIR633-201ENST00000384821 98 ntBASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 BX276092.1-201ENST00000427368 251 ntBASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 RN7SL20P-201ENST00000488827 297 ntBASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTNAP3BQ96NU0 MIRLET7F1-201ENST00000362202 87 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 AC019129.1-201ENST00000403786 261 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 MIR1283-2-201ENST00000408621 87 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 RNA5SP481-201ENST00000516814 122 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 AC103706.3-201ENST00000636297 85 ntBASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-681P-201ENST00000364012 104 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 MIR516A2-201ENST00000384888 90 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 MIR516A1-201ENST00000385033 90 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 SNORA48.1-201ENST00000390879 135 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 MIR548AO-201ENST00000579992 96 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 AC008133.2-201ENST00000624540 351 ntBASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNTNAP3BQ96NU0 Y_RNA.42-201ENST00000362660 108 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-340P-201ENST00000364005 107 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 SNORD38B-201ENST00000384690 67 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 MIR518A2-201ENST00000384966 87 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 RNA5SP237-201ENST00000410414 113 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 AC027119.1-201ENST00000440877 241 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 MIR2113-201ENST00000459007 91 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-977P-201ENST00000516411 103 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 AL513423.1-201ENST00000621695 132 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 SNORD38B-202ENST00000625943 69 ntBASIC2.69□□□□□ -1.98
CNTNAP3BQ96NU0 MIR337-201ENST00000362281 93 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 SNORD45A-201ENST00000384512 84 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 MIR660-201ENST00000385235 97 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-243P-201ENST00000391140 107 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 RNU7-43P-201ENST00000516554 64 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 MIR4709-201ENST00000577272 72 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 AL627230.6-201ENST00000611129 280 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 MIR8070-201ENST00000616510 88 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 AL161722.3-201ENST00000605789 2983 ntBASIC2.68□□□□□ -1.98
CNTNAP3BQ96NU0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 AP000648.3-201ENST00000623539 4507 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 RNA5SP325-201ENST00000363756 130 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 SNORD116-24-201ENST00000384549 92 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 AC121758.2-201ENST00000553271 193 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 AC021506.2-201ENST00000612354 169 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 MIR6733-201ENST00000635723 61 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 U6.109-201ENST00000636749 87 ntBASIC2.67□□□□□ -1.98
CNTNAP3BQ96NU0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms