Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRCH3Q96II8 RNU6-112P-201ENST00000363599 104 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 RNU6-957P-201ENST00000363652 99 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LRCH3Q96II8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
LRCH3Q96II8 AL138827.1-201ENST00000402666 306 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 RNU6-141P-201ENST00000410499 105 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 AC009474.2-201ENST00000451383 136 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.06□□□□□ -1.92
LRCH3Q96II8 AC121758.2-201ENST00000553271 193 ntBASIC3.06□□□□□ -1.92
LRCH3Q96II8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
LRCH3Q96II8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRCH3Q96II8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRCH3Q96II8 MAPK10-362ENST00000641864 4484 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 MIR588-201ENST00000384900 83 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RNU6-630P-201ENST00000391258 106 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RNU4-53P-201ENST00000410828 140 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RNU7-106P-201ENST00000459514 67 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
LRCH3Q96II8 RNU1-91P-201ENST00000364746 163 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 MIR563-201ENST00000385080 79 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 SNORA48.1-201ENST00000390879 135 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 AC244636.1-201ENST00000421152 228 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 RNA5SP481-201ENST00000516814 122 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 MIR3126-201ENST00000577443 74 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 SNORA4-201ENST00000584302 138 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 AL096861.1-201ENST00000610899 123 ntBASIC3.04□□□□□ -1.92
LRCH3Q96II8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRCH3Q96II8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRCH3Q96II8 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 MIR489-201ENST00000384923 84 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 RNU7-26P-201ENST00000458980 63 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.03□□□□□ -1.92
LRCH3Q96II8 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 AL449363.1-201ENST00000617815 186 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 U4.3-201ENST00000621047 82 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.03□□□□□ -1.92
LRCH3Q96II8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRCH3Q96II8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.03□□□□□ -1.92
LRCH3Q96II8 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
LRCH3Q96II8 RNU6-291P-201ENST00000384720 107 ntBASIC3.02□□□□□ -1.93
LRCH3Q96II8 MIR27B-201ENST00000385129 97 ntBASIC3.02□□□□□ -1.93
LRCH3Q96II8 MIR4781-201ENST00000585250 76 ntBASIC3.02□□□□□ -1.93
LRCH3Q96II8 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.02□□□□□ -1.93
LRCH3Q96II8 Y_RNA.42-201ENST00000362660 108 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 SNORA25.4-201ENST00000363666 124 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 Y_RNA.371-201ENST00000365591 113 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 RNU1-148P-201ENST00000384472 162 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 RNU6-205P-201ENST00000390858 107 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 AC092628.1-201ENST00000436250 252 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
LRCH3Q96II8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LRCH3Q96II8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LRCH3Q96II8 RNU6-340P-201ENST00000364005 107 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 Y_RNA.207-201ENST00000364142 106 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 RNU6-1051P-201ENST00000365471 102 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 Y_RNA.443-201ENST00000384135 111 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 AC104389.3-201ENST00000445629 235 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 PRELID3BP2-201ENST00000605362 201 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 MIR6740-201ENST00000618268 113 ntBASIC3□□□□□ -1.93
LRCH3Q96II8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRCH3Q96II8 MIR30D-201ENST00000362283 70 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 SNORD114-1-201ENST00000362705 72 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 RNU6-895P-201ENST00000384125 103 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 SNORD45A-201ENST00000384512 84 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 RNA5SP465-201ENST00000391195 109 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 SNORD63B-201ENST00000411005 70 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 RNU6-1053P-201ENST00000515930 101 ntBASIC2.99□□□□□ -1.93
LRCH3Q96II8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
LRCH3Q96II8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LRCH3Q96II8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRCH3Q96II8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRCH3Q96II8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRCH3Q96II8 AC131280.1-202ENST00000624067 4211 ntBASIC2.98□□□□□ -1.93
LRCH3Q96II8 MIR337-201ENST00000362281 93 ntBASIC2.98□□□□□ -1.93
LRCH3Q96II8 MIR627-201ENST00000384979 97 ntBASIC2.98□□□□□ -1.93
LRCH3Q96II8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.98□□□□□ -1.93
LRCH3Q96II8 RNA5SP137-201ENST00000516833 135 ntBASIC2.98□□□□□ -1.93
LRCH3Q96II8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
LRCH3Q96II8 ZNF209P-201ENST00000593450 2304 ntBASIC2.98□□□□□ -1.93
LRCH3Q96II8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
LRCH3Q96II8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRCH3Q96II8 MIR518A2-201ENST00000384966 87 ntBASIC2.97□□□□□ -1.93
LRCH3Q96II8 RNA5SP501-201ENST00000410990 112 ntBASIC2.97□□□□□ -1.93
LRCH3Q96II8 MIR2113-201ENST00000459007 91 ntBASIC2.97□□□□□ -1.93
LRCH3Q96II8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.97□□□□□ -1.93
LRCH3Q96II8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LRCH3Q96II8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRCH3Q96II8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRCH3Q96II8 AL161431.1-201ENST00000618966 4205 ntBASIC2.96□□□□□ -1.94
LRCH3Q96II8 RNU1-138P-201ENST00000384093 164 ntBASIC2.96□□□□□ -1.94
LRCH3Q96II8 RNU6-1194P-201ENST00000516208 104 ntBASIC2.96□□□□□ -1.94
LRCH3Q96II8 AP000942.3-201ENST00000603702 160 ntBASIC2.96□□□□□ -1.94
LRCH3Q96II8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms