Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 RNU7-79P-201ENST00000516082 62 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 RNU6-904P-201ENST00000516206 101 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 RNU6-521P-201ENST00000516663 105 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
PTCD3Q96EY7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
PTCD3Q96EY7 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-1099P-201ENST00000363533 107 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.360-201ENST00000365512 102 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-409P-201ENST00000384114 104 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 SNORA7.5-201ENST00000410672 110 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-109P-201ENST00000516364 107 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNU6-184P-201ENST00000516514 107 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 AL512310.8-201ENST00000550183 120 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 FAM71BP1-201ENST00000604431 523 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 AP001318.4-201ENST00000616637 121 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 MIR6516-201ENST00000630554 81 ntBASIC1.48□□□□□ -2.17
PTCD3Q96EY7 RNA5SP264-201ENST00000363115 107 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.155-201ENST00000363632 101 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 SNORD115-35-201ENST00000365122 82 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 MIR577-201ENST00000385196 96 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 RNU6-733P-201ENST00000410759 104 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 RPL39P39-201ENST00000455840 151 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 snoU13.2-201ENST00000459201 104 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
PTCD3Q96EY7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PTCD3Q96EY7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU1-17P-201ENST00000363022 152 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNY1P13-201ENST00000365030 105 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU6-1113P-201ENST00000384348 107 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU6-905P-201ENST00000384434 107 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PTCD3Q96EY7 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 SNORD67.1-201ENST00000516618 108 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 AC141557.1-201ENST00000540982 400 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.46□□□□□ -2.18
PTCD3Q96EY7 MIR6740-201ENST00000618268 113 ntBASIC1.46□□□□□ -2.18
PTCD3Q96EY7 RNU6-654P-201ENST00000364373 107 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 MIR206-201ENST00000384872 86 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 MIR588-201ENST00000384900 83 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 MIR563-201ENST00000385080 79 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 UBL5P1-201ENST00000507979 193 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 RNU7-2P-201ENST00000516096 62 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.677-201ENST00000516401 85 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 AC141846.1-201ENST00000568348 142 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 MIR4694-201ENST00000578534 80 ntBASIC1.45□□□□□ -2.18
PTCD3Q96EY7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PTCD3Q96EY7 RNY3P2-201ENST00000362918 102 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU6-832P-201ENST00000363319 107 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU6-640P-201ENST00000363693 105 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU7-137P-201ENST00000516788 62 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNU11-2P-201ENST00000516898 142 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 RNA5SP170-201ENST00000517150 101 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.44□□□□□ -2.18
PTCD3Q96EY7 AL662814.1-201ENST00000617364 121 ntBASIC1.44□□□□□ -2.18
PTCD3Q96EY7 MIR103A2-201ENST00000362154 78 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 MT-TN-201ENST00000387400 73 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 RNU6-1018P-201ENST00000516577 106 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 DEFB131E-201ENST00000532329 154 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 MIR4264-201ENST00000583520 66 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 uc_338.6-201ENST00000613544 171 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 AC105081.1-201ENST00000617727 106 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.818-201ENST00000618813 71 ntBASIC1.43□□□□□ -2.18
PTCD3Q96EY7 RNU6-1313P-201ENST00000362622 102 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNU6-1201P-201ENST00000384227 107 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.544-201ENST00000384650 113 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNA5SP95-201ENST00000410319 137 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
PTCD3Q96EY7 MIR30D-201ENST00000362283 70 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms