Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC004812.1-201ENST00000540773 146 ntBASIC1.2□□□□□ -2.22
HPS3Q969F9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
HPS3Q969F9 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
HPS3Q969F9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HPS3Q969F9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
HPS3Q969F9 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 SNORD115-2-201ENST00000362842 82 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 Y_RNA.298-201ENST00000364960 107 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 SNORD115-20-201ENST00000365099 82 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 SNORA18-201ENST00000384416 132 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 RNU6-257P-201ENST00000410238 98 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 RNU2-35P-201ENST00000516446 142 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 AC108081.1-201ENST00000604358 221 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 AL662814.1-201ENST00000617364 121 ntBASIC1.19□□□□□ -2.22
HPS3Q969F9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
HPS3Q969F9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.18□□□□□ -2.22
HPS3Q969F9 AL512326.2-201ENST00000426359 151 ntBASIC1.18□□□□□ -2.22
HPS3Q969F9 AL158147.1-201ENST00000443970 75 ntBASIC1.18□□□□□ -2.22
HPS3Q969F9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.18□□□□□ -2.22
HPS3Q969F9 U7.7-201ENST00000459276 60 ntBASIC1.18□□□□□ -2.22
HPS3Q969F9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
HPS3Q969F9 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
HPS3Q969F9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HPS3Q969F9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HPS3Q969F9 MIR96-201ENST00000362288 78 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 RNU7-123P-201ENST00000515911 60 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 RNA5SP480-201ENST00000516840 109 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
HPS3Q969F9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.17□□□□□ -2.22
HPS3Q969F9 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 RN7SKP19-201ENST00000516016 252 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 MIR4771-2-201ENST00000577758 74 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 MIR4771-1-201ENST00000582617 74 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 AC022709.1-201ENST00000615967 87 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
HPS3Q969F9 MIR30D-201ENST00000362283 70 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 RNU6-704P-201ENST00000364162 103 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 RNU6-342P-201ENST00000384521 104 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 RNU6-1211P-201ENST00000459179 105 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 PDCD5P2-201ENST00000507570 312 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 RNY4P20-201ENST00000516678 93 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 AC141846.1-201ENST00000568348 142 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 AC025627.3-201ENST00000582078 182 ntBASIC1.15□□□□□ -2.23
HPS3Q969F9 AC023934.1-201ENST00000574529 2389 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 MIR520E-201ENST00000384867 87 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 MIR759-201ENST00000390224 91 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 Y_RNA.586-201ENST00000391146 98 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 RNA5SP136-201ENST00000410906 107 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
HPS3Q969F9 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 Y_RNA.280-201ENST00000364765 112 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 RNU6-187P-201ENST00000384139 106 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 RNU7-79P-201ENST00000516082 62 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 RNU6-977P-201ENST00000516411 103 ntBASIC1.13□□□□□ -2.23
HPS3Q969F9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HPS3Q969F9 RNU4-69P-201ENST00000410677 143 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.12□□□□□ -2.23
HPS3Q969F9 RNU7-185P-201ENST00000459215 60 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 RNA5SP255-201ENST00000516370 107 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 MIR548AE2-201ENST00000583456 67 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
HPS3Q969F9 RNU6-235P-201ENST00000362644 107 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 RNU6-949P-201ENST00000384040 107 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 SNORA32-201ENST00000384072 121 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 MIR1263-201ENST00000408324 86 ntBASIC1.11□□□□□ -2.23
HPS3Q969F9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
HPS3Q969F9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 AL603908.1-201ENST00000406098 201 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 SNORD93-201ENST00000408813 74 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 Y_RNA.617-201ENST00000410920 90 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 RNU6-1061P-201ENST00000516530 99 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms