Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 MIR378A-201ENST00000362177 66 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 SNORD116-21-201ENST00000384507 92 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 SNORD12-201ENST00000391002 90 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 RNA5SP95-201ENST00000410319 137 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 RNU7-62P-201ENST00000458856 62 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 SNORA70.22-201ENST00000517160 124 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 AC036111.3-201ENST00000526389 112 ntBASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CCHCR1Q8TD31 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
CCHCR1Q8TD31 RNU6-1165P-201ENST00000410119 107 ntBASIC1.38□□□□□ -2.19
CCHCR1Q8TD31 AC141846.1-201ENST00000568348 142 ntBASIC1.38□□□□□ -2.19
CCHCR1Q8TD31 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.38□□□□□ -2.19
CCHCR1Q8TD31 MIR6129-201ENST00000616087 109 ntBASIC1.38□□□□□ -2.19
CCHCR1Q8TD31 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 MIR30D-201ENST00000362283 70 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 SNORD113.3-201ENST00000364630 78 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU6-215P-201ENST00000365169 102 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.330-201ENST00000365230 109 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.344-201ENST00000365381 112 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 SNORA32-201ENST00000384072 121 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU6-880P-201ENST00000384526 107 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 SNORD77B-201ENST00000391112 67 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNA5SP237-201ENST00000410414 113 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU7-79P-201ENST00000516082 62 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 RNU6-589P-201ENST00000516485 107 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.35-201ENST00000362601 101 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.281-201ENST00000364774 94 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 RNU6-1325P-201ENST00000364905 105 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 RNY1P13-201ENST00000365030 105 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.362-201ENST00000365518 110 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 SNORD111-201ENST00000408139 94 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.773-201ENST00000607168 90 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 uc_338.6-201ENST00000613544 171 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 AC106800.4-201ENST00000614905 153 ntBASIC1.36□□□□□ -2.19
CCHCR1Q8TD31 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 SNORA2B-201ENST00000384583 137 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 Y_RNA.549-201ENST00000384657 102 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 MT-TF-201ENST00000387314 71 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 MIR18B-201ENST00000454574 71 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AC012676.2-201ENST00000619258 186 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AL035470.1-201ENST00000622571 220 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
CCHCR1Q8TD31 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 RNU6-949P-201ENST00000384040 107 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 RNU6-616P-201ENST00000384353 107 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 SNORD20-201ENST00000384550 80 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 RPL39P34-201ENST00000477141 156 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 FAM71BP1-201ENST00000604431 523 ntBASIC1.34□□□□□ -2.19
CCHCR1Q8TD31 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 AC063976.4-201ENST00000421971 163 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 Y_RNA.709-201ENST00000516952 92 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 SNORA4-201ENST00000584302 138 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
CCHCR1Q8TD31 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 RNA5SP432-201ENST00000362480 116 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 Y_RNA.85-201ENST00000363014 111 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 SNORD114-10-201ENST00000363409 72 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 SNORD67.1-201ENST00000516618 108 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 RNU7-137P-201ENST00000516788 62 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 AL162726.3-218ENST00000636401 95 ntBASIC1.32□□□□□ -2.2
CCHCR1Q8TD31 AL589743.1-201ENST00000551932 2712 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 RNU6-412P-201ENST00000516434 106 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 RNU6-919P-201ENST00000516731 104 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 MIR1255B1-201ENST00000636325 63 ntBASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCHCR1Q8TD31 RNU6-363P-201ENST00000362895 105 ntBASIC1.3□□□□□ -2.2
CCHCR1Q8TD31 SNORA63.5-201ENST00000363548 123 ntBASIC1.3□□□□□ -2.2
CCHCR1Q8TD31 Y_RNA.309-201ENST00000365046 111 ntBASIC1.3□□□□□ -2.2
CCHCR1Q8TD31 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
CCHCR1Q8TD31 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
CCHCR1Q8TD31 RNY4P18-201ENST00000391107 89 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms