Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU7-2P-201ENST00000516096 62 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 SNORD67.1-201ENST00000516618 108 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
CPEB3Q8NE35 AP003716.2-201ENST00000528260 108 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.55□□□□□ -2.16
CPEB3Q8NE35 MIR6845-201ENST00000613182 61 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
CPEB3Q8NE35 MIR206-201ENST00000384872 86 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 AL591806.2-201ENST00000433122 173 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 AC108210.2-201ENST00000503681 201 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 RNU6-947P-201ENST00000516264 106 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
CPEB3Q8NE35 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.54□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.10-201ENST00000362371 110 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNA5SP432-201ENST00000362480 116 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNU6-49P-201ENST00000384256 107 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNU6-1237P-201ENST00000384777 107 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 RNU7-137P-201ENST00000516788 62 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 AC006254.2-201ENST00000603259 279 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
CPEB3Q8NE35 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CPEB3Q8NE35 RNU6-1131P-201ENST00000364955 107 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 MIR1185-1-201ENST00000408598 86 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 RPL39P39-201ENST00000455840 151 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AL133373.1-201ENST00000497098 94 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 UBL5P1-201ENST00000507979 193 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AC141846.1-201ENST00000568348 142 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AC012531.4-201ENST00000616509 177 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AL662814.1-201ENST00000617364 121 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 AL512310.12-203ENST00000640543 90 ntBASIC1.52□□□□□ -2.17
CPEB3Q8NE35 RNU6-170P-201ENST00000362832 104 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 SNORD114-10-201ENST00000363409 72 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 SNORD48-201ENST00000364953 64 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 RNU6-396P-201ENST00000365369 105 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR563-201ENST00000385080 79 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 AC096949.1-201ENST00000412047 152 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 snoU13.2-201ENST00000459201 104 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 RNU6-795P-201ENST00000516323 103 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 RNU6-1006P-201ENST00000516998 103 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR4769-201ENST00000584126 77 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR548Z-201ENST00000584743 97 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 AL442128.1-201ENST00000615151 90 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR6740-201ENST00000618268 113 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 MIR2052-201ENST00000636055 55 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 AC091304.10-201ENST00000641554 121 ntBASIC1.51□□□□□ -2.17
CPEB3Q8NE35 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
CPEB3Q8NE35 Y_RNA.342-201ENST00000365352 113 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 Y_RNA.448-201ENST00000384185 108 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 MIR34C-201ENST00000384831 77 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 AC004941.2-201ENST00000427009 228 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 AC105081.1-201ENST00000617727 106 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 MALAT1.1-201ENST00000618249 95 ntBASIC1.5□□□□□ -2.17
CPEB3Q8NE35 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RNA5SP264-201ENST00000363115 107 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 Y_RNA.247-201ENST00000364500 92 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR588-201ENST00000384900 83 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MT-TN-201ENST00000387400 73 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RNU6-1321P-201ENST00000390905 107 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RNA5SP237-201ENST00000410414 113 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RPL30P7-201ENST00000479312 323 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 RNU6-237P-201ENST00000515985 71 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR4777-201ENST00000583710 86 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 MIR6516-201ENST00000630554 81 ntBASIC1.49□□□□□ -2.17
CPEB3Q8NE35 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CPEB3Q8NE35 SNORD45B-201ENST00000364617 72 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 RNU6-1065P-201ENST00000384513 106 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 MIR764-201ENST00000390811 85 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 MIR2115-201ENST00000516657 100 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 RNU11-2P-201ENST00000516898 142 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 AL512310.8-201ENST00000550183 120 ntBASIC1.48□□□□□ -2.17
CPEB3Q8NE35 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
CPEB3Q8NE35 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CPEB3Q8NE35 MIR103A2-201ENST00000362154 78 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 Y_RNA.95-201ENST00000363079 95 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNU6-654P-201ENST00000364373 107 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNU6-949P-201ENST00000384040 107 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNY1P7-201ENST00000384743 110 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNU6-205P-201ENST00000390858 107 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
CPEB3Q8NE35 RNU6-644P-201ENST00000391155 98 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms