Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 SNORA25.16-201ENST00000516741 121 ntBASIC-0.2□□□□□ -2.44
HDDC3Q8N4P3 DEFB131E-201ENST00000532329 154 ntBASIC-0.2□□□□□ -2.44
HDDC3Q8N4P3 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.2□□□□□ -2.44
HDDC3Q8N4P3 AC021613.1-201ENST00000623880 111 ntBASIC-0.2□□□□□ -2.44
HDDC3Q8N4P3 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 RNU6-453P-201ENST00000516819 85 ntBASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 MIR6841-201ENST00000637129 72 ntBASIC-0.21□□□□□ -2.44
HDDC3Q8N4P3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
HDDC3Q8N4P3 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.22□□□□□ -2.44
HDDC3Q8N4P3 MIR145-201ENST00000384967 88 ntBASIC-0.22□□□□□ -2.44
HDDC3Q8N4P3 MIR4645-201ENST00000583158 77 ntBASIC-0.22□□□□□ -2.44
HDDC3Q8N4P3 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 AC096949.1-201ENST00000412047 152 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 RNU6-893P-201ENST00000458841 100 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 AP003072.1-201ENST00000531740 145 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 MIR4801-201ENST00000582704 82 ntBASIC-0.23□□□□□ -2.45
HDDC3Q8N4P3 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 RNU4-70P-201ENST00000384579 139 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 MTND5P22-201ENST00000458380 195 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 RPL39P34-201ENST00000477141 156 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 AC113195.1-201ENST00000579952 141 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 MIR499B-201ENST00000636498 73 ntBASIC-0.24□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 RNY1P13-201ENST00000365030 105 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 MIR4752-201ENST00000579672 72 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 AL365205.2-201ENST00000594586 68 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 AC108676.2-201ENST00000605225 163 ntBASIC-0.25□□□□□ -2.45
HDDC3Q8N4P3 RNU6-474P-201ENST00000384243 107 ntBASIC-0.26□□□□□ -2.45
HDDC3Q8N4P3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.26□□□□□ -2.45
HDDC3Q8N4P3 MIR4743-201ENST00000584576 69 ntBASIC-0.26□□□□□ -2.45
HDDC3Q8N4P3 MIR101-1-201ENST00000362265 75 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNU4-58P-201ENST00000363192 141 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 SNORA22B-201ENST00000383876 138 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNY3P14-201ENST00000384309 102 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 MIR548L-201ENST00000408303 86 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 RNU6-570P-201ENST00000517051 105 ntBASIC-0.27□□□□□ -2.45
HDDC3Q8N4P3 MIR101-2-201ENST00000362195 79 ntBASIC-0.28□□□□□ -2.45
HDDC3Q8N4P3 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.28□□□□□ -2.45
HDDC3Q8N4P3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.29□□□□□ -2.46
HDDC3Q8N4P3 RNU6-531P-201ENST00000516694 104 ntBASIC-0.29□□□□□ -2.46
HDDC3Q8N4P3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.29□□□□□ -2.46
HDDC3Q8N4P3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.29□□□□□ -2.46
HDDC3Q8N4P3 AL160413.1-201ENST00000622780 310 ntBASIC-0.29□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 RNU6-652P-201ENST00000365488 107 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 SNORD2.1-201ENST00000458762 69 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 RNU7-79P-201ENST00000516082 62 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 MTND5P32-201ENST00000560711 1802 ntBASIC-0.3□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 RNA5SP133-201ENST00000363368 119 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 RNU4-17P-201ENST00000365598 141 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 RNU6-561P-201ENST00000516222 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 AC138869.1-201ENST00000568623 124 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.31□□□□□ -2.46
HDDC3Q8N4P3 SNORD115-24-201ENST00000363528 82 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 SNORA63.5-201ENST00000363548 123 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 RNA5SP245-201ENST00000364239 121 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 SNORD116-25-201ENST00000516517 92 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 U2.14-201ENST00000615943 113 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 AL365265.1-201ENST00000621045 234 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 MIR1295B-201ENST00000636144 60 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 U6.109-201ENST00000636749 87 ntBASIC-0.32□□□□□ -2.46
HDDC3Q8N4P3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 RNU6-651P-201ENST00000411040 105 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 AC104692.1-201ENST00000472406 90 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 MIR4680-201ENST00000580906 66 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 AL442067.1-201ENST00000613261 223 ntBASIC-0.33□□□□□ -2.46
HDDC3Q8N4P3 AC134503.1-201ENST00000633048 54 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 688.1 ms