Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNA5SP33-201ENST00000516687 98 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 MIR548AO-201ENST00000579992 96 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.544-201ENST00000384650 113 ntBASIC1.64□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-602P-201ENST00000411155 105 ntBASIC1.64□□□□□ -2.15
SLC44A3Q8N4M1 RPS3AP1-201ENST00000413190 320 ntBASIC1.64□□□□□ -2.15
SLC44A3Q8N4M1 AC090844.1-201ENST00000422019 156 ntBASIC1.64□□□□□ -2.15
SLC44A3Q8N4M1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-1099P-201ENST00000363533 107 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 RNU4-67P-201ENST00000364569 141 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 SNORA1.1-201ENST00000364671 133 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.369-201ENST00000365568 117 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-616P-201ENST00000384353 107 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 SNORD111.1-201ENST00000516421 86 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 RNA5SP480-201ENST00000516840 109 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 AC141557.1-201ENST00000540982 400 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 MIR4452-201ENST00000583004 71 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 MIR4251-201ENST00000635819 61 ntBASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC44A3Q8N4M1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 ZNF209P-201ENST00000593450 2304 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.360-201ENST00000365512 102 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 RNA5SP259-201ENST00000365541 109 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR488-201ENST00000365739 83 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-342P-201ENST00000384521 104 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR577-201ENST00000385196 96 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-679P-201ENST00000391003 106 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 AL451046.2-201ENST00000403074 277 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-322P-201ENST00000516010 103 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR4421-201ENST00000578133 69 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 MIR4694-201ENST00000578534 80 ntBASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SLC44A3Q8N4M1 RNY3P2-201ENST00000362918 102 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.507-201ENST00000384500 99 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 MIR605-201ENST00000385078 83 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 SNORA40.13-201ENST00000516379 120 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 RNU1-92P-201ENST00000517017 135 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 RNU7-35P-201ENST00000517174 62 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 AL096861.1-201ENST00000610899 123 ntBASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SLC44A3Q8N4M1 SNORA32-201ENST00000384072 121 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 SNORD77B-201ENST00000391112 67 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-733P-201ENST00000410759 104 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-922P-201ENST00000516753 99 ntBASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-832P-201ENST00000363319 107 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 RNA5SP48-201ENST00000363969 126 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.377-201ENST00000365644 108 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-409P-201ENST00000384114 104 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-49P-201ENST00000384256 107 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-1307P-201ENST00000391012 103 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 MTATP8P2-201ENST00000435212 202 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.93-201ENST00000363066 109 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.155-201ENST00000363632 101 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1201P-201ENST00000384227 107 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 SNORA18-201ENST00000384416 132 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 RNY4P30-201ENST00000410216 95 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 DEFB131E-201ENST00000532329 154 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1313P-201ENST00000362622 102 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 RNU4-36P-201ENST00000364294 144 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1131P-201ENST00000364955 107 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 AC096949.1-201ENST00000412047 152 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 AC245047.7-201ENST00000440265 293 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 SCARNA23-201ENST00000516060 130 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1018P-201ENST00000516577 106 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-521P-201ENST00000516663 105 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 AC006254.2-201ENST00000603259 279 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 RMST_2.1-201ENST00000617263 136 ntBASIC1.57□□□□□ -2.16
SLC44A3Q8N4M1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.107-201ENST00000363190 121 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 SNORD115-35-201ENST00000365122 82 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.601-201ENST00000410500 113 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 SNORA7.5-201ENST00000410672 110 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1006P-201ENST00000516998 103 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 AP003716.2-201ENST00000528260 108 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 FAM71BP1-201ENST00000604431 523 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
SLC44A3Q8N4M1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms