Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP173-201ENST00000364857 136 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 MT-TF-201ENST00000387314 71 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 AL356379.1-201ENST00000414105 126 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 SPINT5P-201ENST00000448174 155 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 RPS29P11-201ENST00000496507 171 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 RNU6-947P-201ENST00000516264 106 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 MIR3198-2-201ENST00000577868 80 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 SNRPGP19-201ENST00000603826 189 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 IGLL4P-201ENST00000614590 133 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 MIR6740-201ENST00000618268 113 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 MIR494-201ENST00000349529 81 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 RNU1-112P-201ENST00000364401 164 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP138-201ENST00000365098 114 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 MIR4769-201ENST00000584126 77 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 AC012676.2-201ENST00000619258 186 ntBASIC2.32□□□□□ -2.04
DEPDC4Q8N2C3 MIR30D-201ENST00000362283 70 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 RNY1P1-201ENST00000364372 112 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 MIR1185-1-201ENST00000408598 86 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 RNU7-62P-201ENST00000458856 62 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 snoU13.26-201ENST00000459452 105 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 AC005908.1-201ENST00000468701 347 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 MTND5P40-201ENST00000559945 246 ntBASIC2.31□□□□□ -2.04
DEPDC4Q8N2C3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 MIR103A2-201ENST00000362154 78 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 RNU6-1125P-201ENST00000363601 107 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 RNU6-480P-201ENST00000384332 107 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 AC008413.1-201ENST00000511864 177 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 AP003327.1-201ENST00000529684 127 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 MIR6516-201ENST00000630554 81 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 AC008163.1-202ENST00000636004 2889 ntBASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
DEPDC4Q8N2C3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 RNU6-580P-201ENST00000365159 107 ntBASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP24-201ENST00000516478 95 ntBASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 MIR3664-201ENST00000579074 99 ntBASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
DEPDC4Q8N2C3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
DEPDC4Q8N2C3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 Y_RNA.219-201ENST00000364232 113 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-219P-201ENST00000364728 107 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-402P-201ENST00000410678 103 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 Y_RNA.620-201ENST00000411009 88 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 AC138749.4-201ENST00000563970 127 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 SNORD53-201ENST00000579969 78 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 MIR4668-201ENST00000582284 70 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
DEPDC4Q8N2C3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 SNORD114-30-201ENST00000364448 72 ntBASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-205P-201ENST00000390858 107 ntBASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 MIR18B-201ENST00000454574 71 ntBASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 snoU13.15-201ENST00000459407 104 ntBASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 MIR3937-201ENST00000580135 106 ntBASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.26□□□□□ -2.05
DEPDC4Q8N2C3 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 U8.2-201ENST00000363156 134 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 SNORA2B-201ENST00000384583 137 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 SNORA67.4-201ENST00000384688 142 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-592P-201ENST00000411333 103 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 RNU1-98P-201ENST00000458992 160 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 AC019176.1-201ENST00000518519 225 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 ZNF658B-202ENST00000615961 3375 ntBASIC2.25□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-573P-201ENST00000383938 106 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 SNRPGP12-201ENST00000449481 213 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 AC022137.1-201ENST00000483735 151 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 Y_RNA.685-201ENST00000516532 108 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 MIR1245B-201ENST00000636115 69 ntBASIC2.24□□□□□ -2.05
DEPDC4Q8N2C3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-242P-201ENST00000384359 107 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 MIR27B-201ENST00000385129 97 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 RNU1-78P-201ENST00000391248 165 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 AC245517.4-201ENST00000448601 281 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 AC008834.1-201ENST00000511612 175 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-165P-201ENST00000517170 99 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DEPDC4Q8N2C3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms