Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR588-201ENST00000384900 83 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.703-201ENST00000516846 111 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 AC133485.4-201ENST00000561835 220 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 AC138907.4-201ENST00000570107 226 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 MIR4305-201ENST00000583252 102 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 U7.2-201ENST00000607576 63 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 RNU6-94P-201ENST00000607728 107 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 uc_338.6-201ENST00000613544 171 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 SNORD50.2-201ENST00000365465 70 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 MIR598-201ENST00000384868 97 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 AL022718.1-201ENST00000412004 84 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 AC108081.1-201ENST00000604358 221 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
VPS52Q8N1B4 MIR30D-201ENST00000362283 70 ntBASIC1.03□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.03□□□□□ -2.24
VPS52Q8N1B4 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
VPS52Q8N1B4 MIR18B-201ENST00000454574 71 ntBASIC1.03□□□□□ -2.24
VPS52Q8N1B4 RNU2-35P-201ENST00000516446 142 ntBASIC1.03□□□□□ -2.24
VPS52Q8N1B4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS52Q8N1B4 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 MT-TF-201ENST00000387314 71 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 MTND4LP9-201ENST00000427694 174 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 snoU13.21-201ENST00000459368 105 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 RNA5SP436-201ENST00000516020 115 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 RNA5SP272-201ENST00000516095 111 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 MIR3133-201ENST00000583157 78 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 AC021443.1-201ENST00000604478 211 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 AL137067.1-201ENST00000615933 120 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 AL662814.1-201ENST00000617364 121 ntBASIC1.02□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 RNU6-342P-201ENST00000384521 104 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 MIR1827-201ENST00000408549 66 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 RNU6-257P-201ENST00000410238 98 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 AC004812.1-201ENST00000540773 146 ntBASIC1.01□□□□□ -2.25
VPS52Q8N1B4 SNORD114-26-201ENST00000363543 72 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU6-934P-201ENST00000365154 107 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.470-201ENST00000384307 117 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.531-201ENST00000384589 121 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 SNORA40-201ENST00000388090 126 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU6-994P-201ENST00000410507 111 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RPS26P5-201ENST00000418544 335 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 AL512326.2-201ENST00000426359 151 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU7-123P-201ENST00000515911 60 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 CYP3A137P-201ENST00000562436 69 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 TUG1_4.1-201ENST00000619464 181 ntBASIC1□□□□□ -2.25
VPS52Q8N1B4 RNU6-647P-201ENST00000364243 107 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 SNORA18-201ENST00000384416 132 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 AC067940.1-201ENST00000458411 300 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 RNA5SP255-201ENST00000516370 107 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 IGKV1-22-201ENST00000524313 326 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
VPS52Q8N1B4 RNU6-774P-201ENST00000363238 107 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 RNA5SP237-201ENST00000410414 113 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 SNORD83.1-201ENST00000411362 77 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 AL158147.1-201ENST00000443970 75 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 RNU5E-3P-201ENST00000515913 68 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 RNU7-35P-201ENST00000517174 62 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 AC141846.1-201ENST00000568348 142 ntBASIC0.98□□□□□ -2.25
VPS52Q8N1B4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.586-201ENST00000391146 98 ntBASIC0.97□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.97□□□□□ -2.25
VPS52Q8N1B4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.97□□□□□ -2.25
VPS52Q8N1B4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
VPS52Q8N1B4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 RN7SKP19-201ENST00000516016 252 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 RNY4P20-201ENST00000516678 93 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 RNA5SP33-201ENST00000516687 98 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 AL136317.1-201ENST00000612653 226 ntBASIC0.96□□□□□ -2.26
VPS52Q8N1B4 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU6-704P-201ENST00000364162 103 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU6-949P-201ENST00000384040 107 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU6-187P-201ENST00000384139 106 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 MIR548M-201ENST00000408260 86 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS52Q8N1B4 RNU7-185P-201ENST00000459215 60 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms