Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 AL133373.1-201ENST00000497098 94 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 RNA5SP99-201ENST00000364020 114 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR588-201ENST00000384900 83 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-482P-201ENST00000391068 107 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR1185-1-201ENST00000408598 86 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-795P-201ENST00000516323 103 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR4694-201ENST00000578534 80 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR548Z-201ENST00000584743 97 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
TRIM48Q8IWZ4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RNY1P13-201ENST00000365030 105 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 UBL5P1-201ENST00000507979 193 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-237P-201ENST00000515985 71 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 SCARNA23-201ENST00000516060 130 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-165P-201ENST00000517170 99 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 AC141846.1-201ENST00000568348 142 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 MIR6516-201ENST00000630554 81 ntBASIC1.72□□□□□ -2.13
TRIM48Q8IWZ4 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-654P-201ENST00000364373 107 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1131P-201ENST00000364955 107 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 snoU13.2-201ENST00000459201 104 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 RNU7-137P-201ENST00000516788 62 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 AP003716.2-201ENST00000528260 108 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 AL096840.1-201ENST00000603287 93 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 AC012531.4-201ENST00000616509 177 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 MIR6740-201ENST00000618268 113 ntBASIC1.71□□□□□ -2.14
TRIM48Q8IWZ4 MIR103A2-201ENST00000362154 78 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 SNORD33-201ENST00000362761 85 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 RNA5SP264-201ENST00000363115 107 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 MIR488-201ENST00000365739 83 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.601-201ENST00000410500 113 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 MTATP8P2-201ENST00000435212 202 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 AL512310.8-201ENST00000550183 120 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 AL662814.1-201ENST00000617364 121 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 AC091304.10-201ENST00000641554 121 ntBASIC1.7□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 MIR2115-201ENST00000516657 100 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 AP000753.3-201ENST00000604083 169 ntBASIC1.69□□□□□ -2.14
TRIM48Q8IWZ4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 MIR34C-201ENST00000384831 77 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 RPS27P16-201ENST00000425758 201 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 AC108729.3-201ENST00000513484 108 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 uc_338.6-201ENST00000613544 171 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 AL442128.1-201ENST00000615151 90 ntBASIC1.68□□□□□ -2.14
TRIM48Q8IWZ4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.10-201ENST00000362371 110 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-170P-201ENST00000362832 104 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 SNORD114-10-201ENST00000363409 72 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-49P-201ENST00000384256 107 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNY1P7-201ENST00000384743 110 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNU1-78P-201ENST00000391248 165 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNU7-62P-201ENST00000458856 62 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 AC048334.1-201ENST00000477975 159 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 AC006254.2-201ENST00000603259 279 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 MIR376B-201ENST00000614515 100 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 MIR4679-1-201ENST00000637619 75 ntBASIC1.67□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-865P-201ENST00000364772 107 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 RNU6-644P-201ENST00000391155 98 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 MIR4264-201ENST00000583520 66 ntBASIC1.66□□□□□ -2.14
TRIM48Q8IWZ4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.65□□□□□ -2.15
TRIM48Q8IWZ4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.65□□□□□ -2.15
TRIM48Q8IWZ4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM48Q8IWZ4 MRPL35P3-201ENST00000421557 364 ntBASIC1.65□□□□□ -2.15
TRIM48Q8IWZ4 RPS29P28-201ENST00000446439 141 ntBASIC1.65□□□□□ -2.15
TRIM48Q8IWZ4 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms