Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 SNORD37.2-201ENST00000391075 66 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 RNU4-83P-201ENST00000410863 133 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 RNU5E-9P-201ENST00000411164 104 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 AL022718.1-201ENST00000412004 84 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 AC011603.4-201ENST00000611325 277 ntBASIC0.68□□□□□ -2.3
LRRTM4Q86VH4 Y_RNA.240-201ENST00000364469 95 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 RNU6-690P-201ENST00000365242 106 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 RNU6-1318P-201ENST00000365389 103 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 RNU6-42P-201ENST00000384165 107 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 RNU7-120P-201ENST00000459334 63 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 RNA5SP236-201ENST00000516169 116 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
LRRTM4Q86VH4 MIR18A-201ENST00000362310 71 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 RNA5SP144-201ENST00000410846 116 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 DNAJC19P2-201ENST00000593340 302 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 AC008608.1-201ENST00000603910 127 ntBASIC0.66□□□□□ -2.3
LRRTM4Q86VH4 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 RNU6-949P-201ENST00000384040 107 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 RNU7-113P-201ENST00000459273 62 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
LRRTM4Q86VH4 RNU6-349P-201ENST00000362402 107 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 SNORD18B-201ENST00000365659 72 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 SNORA81.3-201ENST00000517283 198 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 AP003327.1-201ENST00000529684 127 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.63□□□□□ -2.31
LRRTM4Q86VH4 RNU6-861P-201ENST00000516745 106 ntBASIC0.63□□□□□ -2.31
LRRTM4Q86VH4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.63□□□□□ -2.31
LRRTM4Q86VH4 RNU6-403P-201ENST00000363163 104 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 U8.15-201ENST00000390947 134 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNU6-588P-201ENST00000410281 105 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNU6-1135P-201ENST00000411083 103 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 snoU13.18-201ENST00000459483 104 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 AC002350.1-201ENST00000490759 375 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 RNU7-121P-201ENST00000516604 62 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.62□□□□□ -2.31
LRRTM4Q86VH4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.785-201ENST00000384290 109 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.584-201ENST00000391090 114 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
LRRTM4Q86VH4 SNORA72.6-201ENST00000384520 129 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 RNU6-765P-201ENST00000516916 99 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 AC133485.4-201ENST00000561835 220 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 AC138907.4-201ENST00000570107 226 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 MIR4305-201ENST00000583252 102 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 MIR6082-201ENST00000613604 109 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 MIR3658-201ENST00000636291 56 ntBASIC0.6□□□□□ -2.31
LRRTM4Q86VH4 RNU6-682P-201ENST00000363843 106 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 RNY1P13-201ENST00000365030 105 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.441-201ENST00000384123 112 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 RNU6-469P-201ENST00000516253 101 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 RNA5SP33-201ENST00000516687 98 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.59□□□□□ -2.31
LRRTM4Q86VH4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 RNU6-240P-201ENST00000516098 97 ntBASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 RNU7-35P-201ENST00000517174 62 ntBASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 AC021443.1-201ENST00000604478 211 ntBASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LRRTM4Q86VH4 SNORD115-2-201ENST00000362842 82 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 Y_RNA.120-201ENST00000363304 110 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 SNORD115-20-201ENST00000365099 82 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 RNU7-79P-201ENST00000516082 62 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 MIR4491-201ENST00000581087 68 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 AC004792.1-201ENST00000614523 137 ntBASIC0.57□□□□□ -2.32
LRRTM4Q86VH4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.56□□□□□ -2.32
LRRTM4Q86VH4 RNU6-182P-201ENST00000516970 105 ntBASIC0.56□□□□□ -2.32
LRRTM4Q86VH4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.56□□□□□ -2.32
LRRTM4Q86VH4 AC112693.2-201ENST00000556538 232 ntBASIC0.56□□□□□ -2.32
LRRTM4Q86VH4 MIR6515-201ENST00000619843 57 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms