Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR30D-201ENST00000362283 70 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 Y_RNA.35-201ENST00000362601 101 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 RNY1P13-201ENST00000365030 105 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 Y_RNA.344-201ENST00000365381 112 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 Y_RNA.362-201ENST00000365518 110 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-429P-201ENST00000384582 108 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 Y_RNA.549-201ENST00000384657 102 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 Y_RNA.773-201ENST00000607168 90 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 AL035470.1-201ENST00000622571 220 ntBASIC1.2□□□□□ -2.22
PTCHD4Q6ZW05 SNORD115-19-201ENST00000363098 82 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 SNORD115-18-201ENST00000363293 82 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 SNORD115-17-201ENST00000364612 82 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-616P-201ENST00000384353 107 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-880P-201ENST00000384526 107 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 SNORD67.1-201ENST00000516618 108 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-94P-201ENST00000607728 107 ntBASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PTCHD4Q6ZW05 RNU1-17P-201ENST00000363022 152 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-1325P-201ENST00000364905 105 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 FAM71BP1-201ENST00000604431 523 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 MIR1255B1-201ENST00000636325 63 ntBASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.18□□□□□ -2.22
PTCHD4Q6ZW05 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 SNORA63.5-201ENST00000363548 123 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-949P-201ENST00000384040 107 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 MT-TF-201ENST00000387314 71 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 SNORA17.3-201ENST00000391159 129 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 MIR4679-2-201ENST00000578358 77 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
PTCHD4Q6ZW05 SNORD20-201ENST00000384550 80 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 RPL39P25-201ENST00000449384 154 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 MIR18B-201ENST00000454574 71 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 RNU7-137P-201ENST00000516788 62 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 ZNF209P-201ENST00000593450 2304 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 AL391516.1-201ENST00000554380 2449 ntBASIC1.16□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-934P-201ENST00000365154 107 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-994P-201ENST00000410507 111 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 AC015818.7-201ENST00000428754 109 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 AL591806.2-201ENST00000433122 173 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 AC087499.7-201ENST00000441958 109 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-589P-201ENST00000516485 107 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 AC105081.1-201ENST00000617727 106 ntBASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PTCHD4Q6ZW05 SNORD114-10-201ENST00000363409 72 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 Y_RNA.281-201ENST00000364774 94 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-215P-201ENST00000365169 102 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 MIR206-201ENST00000384872 86 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 U8.15-201ENST00000390947 134 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 RPL39P34-201ENST00000477141 156 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 MIR4771-2-201ENST00000577758 74 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 MIR4771-1-201ENST00000582617 74 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PTCHD4Q6ZW05 AC023934.1-201ENST00000574529 2389 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 Y_RNA.85-201ENST00000363014 111 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU4-67P-201ENST00000364569 141 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-816P-201ENST00000390914 107 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-1268P-201ENST00000391214 107 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-1239P-201ENST00000391310 107 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU7-2P-201ENST00000516096 62 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 Y_RNA.709-201ENST00000516952 92 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU1-92P-201ENST00000517017 135 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 AL162726.3-218ENST00000636401 95 ntBASIC1.13□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-363P-201ENST00000362895 105 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 SNORD115-35-201ENST00000365122 82 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-1307P-201ENST00000391012 103 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 RNU7-185P-201ENST00000459215 60 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-412P-201ENST00000516434 106 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 RNU6-521P-201ENST00000516663 105 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.12□□□□□ -2.23
PTCHD4Q6ZW05 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms