Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 MIR3171-201ENST00000584270 74 ntBASIC-0.11□□□□□ -2.43
TRIM40Q6P9F5 AL442067.1-201ENST00000613261 223 ntBASIC-0.11□□□□□ -2.43
TRIM40Q6P9F5 AC067863.3-201ENST00000624172 122 ntBASIC-0.11□□□□□ -2.43
TRIM40Q6P9F5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.11□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 RNA5SP128-201ENST00000365305 116 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 RNU4-17P-201ENST00000365598 141 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 AP003072.1-201ENST00000531740 145 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 AL442663.2-201ENST00000554385 511 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 MIR4282-201ENST00000583613 67 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 MIR371B-201ENST00000638082 66 ntBASIC-0.12□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.13□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.13□□□□□ -2.43
TRIM40Q6P9F5 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
TRIM40Q6P9F5 AC020661.2-201ENST00000560114 134 ntBASIC-0.13□□□□□ -2.43
TRIM40Q6P9F5 MIR335-201ENST00000362173 94 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 RNU6-103P-201ENST00000363686 107 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 RNU4-16P-201ENST00000364737 141 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 SNORA2A-201ENST00000383885 135 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 RNU6-985P-201ENST00000410182 104 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 SNORD116-25-201ENST00000516517 92 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 SCARNA15-202ENST00000516881 127 ntBASIC-0.14□□□□□ -2.43
TRIM40Q6P9F5 RNA5SP257-201ENST00000363023 116 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 RNU6-978P-201ENST00000364371 103 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 MIR145-201ENST00000384967 88 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 RPL39P34-201ENST00000477141 156 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 RNU7-79P-201ENST00000516082 62 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 DEFB131E-201ENST00000532329 154 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 MTND5P32-201ENST00000560711 1802 ntBASIC-0.15□□□□□ -2.43
TRIM40Q6P9F5 RNU4-58P-201ENST00000363192 141 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 RNA5SP245-201ENST00000364239 121 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 RNU6-713P-201ENST00000384761 107 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 MIR624-201ENST00000385217 97 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 RNU6-531P-201ENST00000516694 104 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 MIR593-201ENST00000384856 100 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 AL121914.1-201ENST00000450188 156 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 RNU7-35P-201ENST00000517174 62 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 MIR378D2-201ENST00000580636 98 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 RNU1-29P-201ENST00000606574 126 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 MIR499B-201ENST00000636498 73 ntBASIC-0.17□□□□□ -2.44
TRIM40Q6P9F5 RNA5SP133-201ENST00000363368 119 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 SNORA63.5-201ENST00000363548 123 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 RNU4-70P-201ENST00000384579 139 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 MIR892B-201ENST00000401279 77 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 MIR548H2-201ENST00000408874 88 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 MTND4LP11-201ENST00000422184 280 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 RNU6-782P-201ENST00000516852 104 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 MIR4744-201ENST00000581563 82 ntBASIC-0.18□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.19□□□□□ -2.44
TRIM40Q6P9F5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
TRIM40Q6P9F5 SNORA33.2-201ENST00000365413 134 ntBASIC-0.19□□□□□ -2.44
TRIM40Q6P9F5 RNY1P6-201ENST00000384193 109 ntBASIC-0.19□□□□□ -2.44
TRIM40Q6P9F5 MIR101-2-201ENST00000362195 79 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 RNU6-639P-201ENST00000384074 107 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 RNA5SP144-201ENST00000410846 116 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 MIR4305-201ENST00000583252 102 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 U6.109-201ENST00000636749 87 ntBASIC-0.2□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 SNORD115-24-201ENST00000363528 82 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 RNU6-726P-201ENST00000364680 107 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 RNU6-578P-201ENST00000390980 103 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 AC244505.6-201ENST00000452829 130 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 RNU7-113P-201ENST00000459273 62 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 AC138869.1-201ENST00000568623 124 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 AL356055.1-201ENST00000602528 446 ntBASIC-0.21□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 RNU6-702P-201ENST00000364982 107 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 AL117351.2-201ENST00000513571 157 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 AC138749.4-201ENST00000563970 127 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 AC011921.3-201ENST00000605540 361 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 U6.104-201ENST00000637979 90 ntBASIC-0.22□□□□□ -2.44
TRIM40Q6P9F5 SNORD115-2-201ENST00000362842 82 ntBASIC-0.23□□□□□ -2.45
TRIM40Q6P9F5 SNORD115-20-201ENST00000365099 82 ntBASIC-0.23□□□□□ -2.45
TRIM40Q6P9F5 RNU6-652P-201ENST00000365488 107 ntBASIC-0.23□□□□□ -2.45
TRIM40Q6P9F5 RNU6V-201ENST00000384105 107 ntBASIC-0.23□□□□□ -2.45
TRIM40Q6P9F5 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms