Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
NKX3-2P78367 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NKX3-2P78367 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 Y_RNA.93-201ENST00000363066 109 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 Y_RNA.107-201ENST00000363190 121 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 Y_RNA.601-201ENST00000410500 113 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 TRMT112P2-201ENST00000512910 132 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 RNA5SP445-201ENST00000515889 115 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 MIR548Z-201ENST00000584743 97 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 FAM71BP1-201ENST00000604431 523 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 AC012531.4-201ENST00000616509 177 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 MIR8070-201ENST00000616510 88 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
NKX3-2P78367 Y_RNA.466-201ENST00000384294 113 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 RNU6-1307P-201ENST00000391012 103 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 SNORD111.1-201ENST00000516421 86 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 CYP3A52P-201ENST00000563326 91 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 AC091304.10-201ENST00000641554 121 ntBASIC1.88□□□□□ -2.11
NKX3-2P78367 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NKX3-2P78367 SNORD73B-201ENST00000364394 72 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 Y_RNA.342-201ENST00000365352 113 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NKX3-2P78367 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 SNORA72.7-201ENST00000516349 94 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 RNU7-35P-201ENST00000517174 62 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 MALAT1.1-201ENST00000618249 95 ntBASIC1.87□□□□□ -2.11
NKX3-2P78367 SNORD115-35-201ENST00000365122 82 ntBASIC1.86□□□□□ -2.11
NKX3-2P78367 Y_RNA.354-201ENST00000365448 111 ntBASIC1.86□□□□□ -2.11
NKX3-2P78367 RNU6-1201P-201ENST00000384227 107 ntBASIC1.86□□□□□ -2.11
NKX3-2P78367 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
NKX3-2P78367 MIR2052-201ENST00000636055 55 ntBASIC1.86□□□□□ -2.11
NKX3-2P78367 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NKX3-2P78367 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
NKX3-2P78367 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NKX3-2P78367 RNU6-170P-201ENST00000362832 104 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 RNU6-1237P-201ENST00000384777 107 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 MIR206-201ENST00000384872 86 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 MIR499A-201ENST00000384903 122 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 AL512310.12-203ENST00000640543 90 ntBASIC1.85□□□□□ -2.11
NKX3-2P78367 Y_RNA.10-201ENST00000362371 110 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 SNORD38B-201ENST00000384690 67 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-644P-201ENST00000391155 98 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-1086P-201ENST00000410930 100 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 snoU13.25-201ENST00000458945 104 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 UBL5P1-201ENST00000507979 193 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU7-61P-201ENST00000515897 61 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU7-79P-201ENST00000516082 62 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU7-2P-201ENST00000516096 62 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-1018P-201ENST00000516577 106 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 SNORD67.1-201ENST00000516618 108 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-762P-201ENST00000517107 102 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-844P-201ENST00000517175 102 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX3-2P78367 PRELID3BP2-201ENST00000605362 201 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 SNORD38B-202ENST00000625943 69 ntBASIC1.84□□□□□ -2.11
NKX3-2P78367 RNU6-1313P-201ENST00000362622 102 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 SNORA25.3-201ENST00000363205 127 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 Y_RNA.220-201ENST00000364244 109 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 Y_RNA.247-201ENST00000364500 92 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 MIR1302-7-201ENST00000408841 72 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 AC244023.1-201ENST00000426884 112 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 MIR4777-201ENST00000583710 86 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 AC242498.1-201ENST00000604134 111 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 AL442128.1-201ENST00000615151 90 ntBASIC1.83□□□□□ -2.12
NKX3-2P78367 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 Y_RNA.377-201ENST00000365644 108 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 AC004941.2-201ENST00000427009 228 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 Y_RNA.659-201ENST00000515994 113 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 RNU6-162P-201ENST00000516228 103 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NKX3-2P78367 AC105081.1-201ENST00000617727 106 ntBASIC1.82□□□□□ -2.12
NKX3-2P78367 RNA5SP48-201ENST00000363969 126 ntBASIC1.81□□□□□ -2.12
NKX3-2P78367 Y_RNA.290-201ENST00000364879 114 ntBASIC1.81□□□□□ -2.12
NKX3-2P78367 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
NKX3-2P78367 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.81□□□□□ -2.12
NKX3-2P78367 GHRLOS.1-201ENST00000610995 70 ntBASIC1.81□□□□□ -2.12
NKX3-2P78367 MIR8063-201ENST00000621930 81 ntBASIC1.81□□□□□ -2.12
NKX3-2P78367 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NKX3-2P78367 Y_RNA.467-201ENST00000384297 102 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 Y_RNA.558-201ENST00000384685 113 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 MIR34C-201ENST00000384831 77 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 RNU6-1321P-201ENST00000390905 107 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 AC096949.1-201ENST00000412047 152 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 RNU7-137P-201ENST00000516788 62 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms