Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MIR8062-201ENST00000621515 85 ntBASIC0.02□□□□□ -2.41
CDH4P55283 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
CDH4P55283 Y_RNA.76-201ENST00000362931 109 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
CDH4P55283 Y_RNA.262-201ENST00000364641 102 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-535P-201ENST00000384722 107 ntBASIC0.01□□□□□ -2.41
CDH4P55283 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-1086P-201ENST00000410930 100 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNA5SP127-201ENST00000411051 133 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU5E-9P-201ENST00000411164 104 ntBASIC0.01□□□□□ -2.41
CDH4P55283 MTATP8P1-201ENST00000467115 207 ntBASIC0.01□□□□□ -2.41
CDH4P55283 SNORD116-25-201ENST00000516517 92 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-635P-201ENST00000516651 102 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-1149P-201ENST00000516810 97 ntBASIC0.01□□□□□ -2.41
CDH4P55283 Y_RNA.757-201ENST00000578934 114 ntBASIC0.01□□□□□ -2.41
CDH4P55283 MIR378D2-201ENST00000580636 98 ntBASIC0.01□□□□□ -2.41
CDH4P55283 MIR4744-201ENST00000581563 82 ntBASIC0.01□□□□□ -2.41
CDH4P55283 RNU6-797P-201ENST00000363101 109 ntBASIC0□□□□□ -2.41
CDH4P55283 RNU4-16P-201ENST00000364737 141 ntBASIC0□□□□□ -2.41
CDH4P55283 RNU6-1227P-201ENST00000383981 107 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR624-201ENST00000385217 97 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR1302-6-201ENST00000408466 90 ntBASIC0□□□□□ -2.41
CDH4P55283 AL121914.1-201ENST00000450188 156 ntBASIC0□□□□□ -2.41
CDH4P55283 RNA5SP227-201ENST00000516184 113 ntBASIC0□□□□□ -2.41
CDH4P55283 Y_RNA.697-201ENST00000516776 113 ntBASIC0□□□□□ -2.41
CDH4P55283 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
CDH4P55283 MTND5P32-201ENST00000560711 1802 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR4639-201ENST00000584938 69 ntBASIC0□□□□□ -2.41
CDH4P55283 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
CDH4P55283 AC091304.10-201ENST00000641554 121 ntBASIC0□□□□□ -2.41
CDH4P55283 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNU6-238P-201ENST00000363313 106 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNU6-578P-201ENST00000390980 103 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNU7-79P-201ENST00000516082 62 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNY3P16-201ENST00000516338 101 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 AC244669.1-204ENST00000621564 178 ntBASIC-0.01□□□□□ -2.41
CDH4P55283 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
CDH4P55283 MIR548F4-201ENST00000408515 105 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU6-848P-201ENST00000515948 107 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU6-617P-201ENST00000516147 107 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU6-473P-201ENST00000516164 107 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU7-35P-201ENST00000517174 62 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 AC044792.1-201ENST00000593294 196 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
CDH4P55283 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 RNA5SP144-201ENST00000410846 116 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 RNU6-893P-201ENST00000458841 100 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.03□□□□□ -2.41
CDH4P55283 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 MIR643-201ENST00000385267 97 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 RNU6-531P-201ENST00000516694 104 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 AC067863.3-201ENST00000624172 122 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 U6.104-201ENST00000637979 90 ntBASIC-0.04□□□□□ -2.42
CDH4P55283 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 RNA5SP257-201ENST00000363023 116 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 SNORA63.5-201ENST00000363548 123 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 RNY4P28-201ENST00000365281 93 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 RNY1P6-201ENST00000384193 109 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 MIR4752-201ENST00000579672 72 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 RNU2-4P-201ENST00000606190 192 ntBASIC-0.05□□□□□ -2.42
CDH4P55283 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 SNORD115-2-201ENST00000362842 82 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 SNORD115-20-201ENST00000365099 82 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 RNU6-643P-201ENST00000384018 107 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 AP003072.1-201ENST00000531740 145 ntBASIC-0.06□□□□□ -2.42
CDH4P55283 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms