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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
MIR8062-201
ENST00000621515
85 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
KIF20B-201
ENST00000260753
6306 nt
APPRIS P3
TSL 1 (best)
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
Y_RNA.76-201
ENST00000362931
109 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNA5SP214-201
ENST00000363378
118 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
Y_RNA.262-201
ENST00000364641
102 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-187P-201
ENST00000384139
106 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-535P-201
ENST00000384722
107 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
PCNPP3-201
ENST00000393579
471 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-1086P-201
ENST00000410930
100 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNA5SP127-201
ENST00000411051
133 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU5E-9P-201
ENST00000411164
104 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
MTATP8P1-201
ENST00000467115
207 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
SNORD116-25-201
ENST00000516517
92 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-635P-201
ENST00000516651
102 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-135P-201
ENST00000516769
101 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-1149P-201
ENST00000516810
97 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
Y_RNA.757-201
ENST00000578934
114 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
MIR378D2-201
ENST00000580636
98 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
MIR4744-201
ENST00000581563
82 nt
BASIC
0.01
□□□□□ -2.41
CDH4
P55283
RNU6-797P-201
ENST00000363101
109 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
RNU4-16P-201
ENST00000364737
141 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
RNU6-1227P-201
ENST00000383981
107 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR624-201
ENST00000385217
97 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR1302-6-201
ENST00000408466
90 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
AL121914.1-201
ENST00000450188
156 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
RNA5SP227-201
ENST00000516184
113 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
Y_RNA.697-201
ENST00000516776
113 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
RNU7-70P-201
ENST00000516941
66 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MTND5P32-201
ENST00000560711
1802 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR4667-201
ENST00000578933
66 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR5190-201
ENST00000581537
80 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR4639-201
ENST00000584938
69 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
MIR4768-201
ENST00000585270
74 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
AC091304.10-201
ENST00000641554
121 nt
BASIC
0
□□□□□ -2.41
CDH4
P55283
SNORA9.1-201
ENST00000362412
131 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNU6-238P-201
ENST00000363313
106 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
Y_RNA.171-201
ENST00000363760
102 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNA5SP245-201
ENST00000364239
121 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNU6-1126P-201
ENST00000384002
107 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
Y_RNA.423-201
ENST00000384057
113 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
Y_RNA.461-201
ENST00000384263
103 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNU6-578P-201
ENST00000390980
103 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNU7-79P-201
ENST00000516082
62 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNY3P16-201
ENST00000516338
101 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
RNU6-1153P-201
ENST00000516760
105 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
AC104408.1-201
ENST00000605241
170 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
TUG1_4.1-201
ENST00000619464
181 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
AC244669.1-204
ENST00000621564
178 nt
BASIC
-0.01
□□□□□ -2.41
CDH4
P55283
MIR411-201
ENST00000362239
96 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
SNORD114-5-201
ENST00000362928
70 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
SNORD114-16-201
ENST00000363044
70 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU6-1229P-201
ENST00000364295
107 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
Y_RNA.277-201
ENST00000364754
102 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
Y_RNA.292-201
ENST00000364904
97 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
Y_RNA.352-201
ENST00000365439
102 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
TRAJ1-201
ENST00000390536
62 nt
APPRIS P1
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
MIR548F4-201
ENST00000408515
105 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU6-848P-201
ENST00000515948
107 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU6-617P-201
ENST00000516147
107 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU6-473P-201
ENST00000516164
107 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU6-1049P-201
ENST00000516414
107 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU7-35P-201
ENST00000517174
62 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
AC044792.1-201
ENST00000593294
196 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
RNU1-29P-201
ENST00000606574
126 nt
BASIC
-0.02
□□□□□ -2.41
CDH4
P55283
Y_RNA.470-201
ENST00000384307
117 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
RNA5SP144-201
ENST00000410846
116 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
RNU6-893P-201
ENST00000458841
100 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
RNU7-129P-201
ENST00000516128
62 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
RNU6-1194P-201
ENST00000516208
104 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
CLRN1-AS1.1-201
ENST00000615643
79 nt
BASIC
-0.03
□□□□□ -2.41
CDH4
P55283
Y_RNA.396-201
ENST00000383949
103 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
Y_RNA.574-201
ENST00000384766
95 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
MIR643-201
ENST00000385267
97 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
RNU6-127P-201
ENST00000390897
107 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
Y_RNA.604-201
ENST00000410574
102 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
RNU6-531P-201
ENST00000516694
104 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
Y_RNA.720-201
ENST00000517166
92 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
MIR4290-201
ENST00000583807
95 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
AC067863.3-201
ENST00000624172
122 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
U6.104-201
ENST00000637979
90 nt
BASIC
-0.04
□□□□□ -2.42
CDH4
P55283
Y_RNA.30-201
ENST00000362572
97 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
RNA5SP257-201
ENST00000363023
116 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
SNORA63.5-201
ENST00000363548
123 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
Y_RNA.308-201
ENST00000365043
101 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
RNY4P28-201
ENST00000365281
93 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
Y_RNA.362-201
ENST00000365518
110 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
RNY1P6-201
ENST00000384193
109 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
Y_RNA.515-201
ENST00000384535
112 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
RNU6-1232P-201
ENST00000516299
86 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
MRPS18CP4-201
ENST00000535821
231 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
MIR4752-201
ENST00000579672
72 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
RNU2-4P-201
ENST00000606190
192 nt
BASIC
-0.05
□□□□□ -2.42
CDH4
P55283
Y_RNA.54-201
ENST00000362766
105 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
SNORD115-2-201
ENST00000362842
82 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
SNORD115-20-201
ENST00000365099
82 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
Y_RNA.366-201
ENST00000365540
102 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
RNU6-643P-201
ENST00000384018
107 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
MIR760-201
ENST00000390220
80 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
AP003072.1-201
ENST00000531740
145 nt
BASIC
-0.06
□□□□□ -2.42
CDH4
P55283
HOTAIRM1_4.1-201
ENST00000617934
102 nt
BASIC
-0.06
□□□□□ -2.42
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Retrieved 100 of 98,524 protein–RNA pairs in 172 ms