Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-239P-201ENST00000390990 99 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 RNA5SP261-201ENST00000410536 106 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 RNU6-1258P-201ENST00000516911 111 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 MIR924-201ENST00000638017 53 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 RNU6-349P-201ENST00000362402 107 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 Y_RNA.337-201ENST00000365312 102 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 Y_RNA.441-201ENST00000384123 112 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 Y_RNA.785-201ENST00000384290 109 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 RNU6-588P-201ENST00000410281 105 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 RNU2-60P-201ENST00000517290 128 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 MIR3152-201ENST00000579801 74 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 AC004792.1-201ENST00000614523 137 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 MIR3658-201ENST00000636291 56 ntBASIC0.59□□□□□ -2.31
HMGCS2P54868 Y_RNA.29-201ENST00000362570 113 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 SNORA22.1-201ENST00000362701 134 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 RNA5SP457-201ENST00000363657 124 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 RNU4-16P-201ENST00000364737 141 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
HMGCS2P54868 Y_RNA.497-201ENST00000384447 98 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 RNU7-185P-201ENST00000459215 60 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 AC074198.2-201ENST00000508153 258 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 RNU6-977P-201ENST00000516411 103 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 Y_RNA.700-201ENST00000516806 100 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 RNU7-70P-201ENST00000516941 66 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 SNORA81.3-201ENST00000517283 198 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 Y_RNA.757-201ENST00000578934 114 ntBASIC0.58□□□□□ -2.32
HMGCS2P54868 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HMGCS2P54868 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
HMGCS2P54868 MIR520F-201ENST00000384824 87 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 MIR125B2-201ENST00000385128 89 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 SNORA75.5-201ENST00000391291 81 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
HMGCS2P54868 MIR3646-201ENST00000578301 84 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 MIR8087-201ENST00000612745 78 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 AL662814.1-201ENST00000617364 121 ntBASIC0.57□□□□□ -2.32
HMGCS2P54868 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
HMGCS2P54868 RNU6-818P-201ENST00000364837 108 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 Y_RNA.357-201ENST00000365487 109 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
HMGCS2P54868 RNY1P6-201ENST00000384193 109 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 MIR573-201ENST00000384964 99 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 MIR520H-201ENST00000385126 88 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 RNU6-1135P-201ENST00000411083 103 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 AC096949.1-201ENST00000412047 152 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 AC011195.1-201ENST00000578177 177 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 AC008608.1-201ENST00000603910 127 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 MIR6844-201ENST00000637122 62 ntBASIC0.56□□□□□ -2.32
HMGCS2P54868 MIR330-201ENST00000362196 94 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 RNU6-508P-201ENST00000363231 103 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 Y_RNA.171-201ENST00000363760 102 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 Y_RNA.251-201ENST00000364551 99 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 SNORA20-201ENST00000384662 132 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 RNA5SP144-201ENST00000410846 116 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 Y_RNA.662-201ENST00000516028 97 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 AC141846.1-201ENST00000568348 142 ntBASIC0.55□□□□□ -2.32
HMGCS2P54868 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.55□□□□□ -2.32
HMGCS2P54868 RNU6-1318P-201ENST00000365389 103 ntBASIC0.54□□□□□ -2.32
HMGCS2P54868 U8.15-201ENST00000390947 134 ntBASIC0.54□□□□□ -2.32
HMGCS2P54868 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
HMGCS2P54868 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.32
HMGCS2P54868 DNAJC19P2-201ENST00000593340 302 ntBASIC0.54□□□□□ -2.32
HMGCS2P54868 Y_RNA.272-201ENST00000364696 102 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 Y_RNA.470-201ENST00000384307 117 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 SNORA18-201ENST00000384416 132 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 MIR1257-201ENST00000408490 117 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 RNU7-102P-201ENST00000458948 62 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 Y_RNA.651-201ENST00000459380 103 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 RNU7-156P-201ENST00000517214 74 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 MIR8066-201ENST00000617280 78 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.53□□□□□ -2.32
HMGCS2P54868 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
HMGCS2P54868 SNORD115-2-201ENST00000362842 82 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 SNORD115-20-201ENST00000365099 82 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 PCNPP3-201ENST00000393579 471 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 RNA5SP237-201ENST00000410414 113 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 RNU6-394P-201ENST00000410735 107 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 AL512326.2-201ENST00000426359 151 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 RNU2-35P-201ENST00000516446 142 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 AC090897.1-201ENST00000580909 226 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 AL109933.3-201ENST00000619095 188 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
HMGCS2P54868 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
HMGCS2P54868 Y_RNA.120-201ENST00000363304 110 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 RNU6-309P-201ENST00000364573 106 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 RNY1P13-201ENST00000365030 105 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms