Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-1258P-201ENST00000516911 111 ntBASIC1.2□□□□□ -2.22
COPAP53621 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
COPAP53621 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
COPAP53621 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
COPAP53621 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
COPAP53621 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
COPAP53621 RNU6-1237P-201ENST00000384777 107 ntBASIC1.19□□□□□ -2.22
COPAP53621 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
COPAP53621 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
COPAP53621 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
COPAP53621 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
COPAP53621 RNU6-1234P-201ENST00000516877 103 ntBASIC1.19□□□□□ -2.22
COPAP53621 IGKV1-22-201ENST00000524313 326 ntBASIC1.19□□□□□ -2.22
COPAP53621 SNORA4-201ENST00000584302 138 ntBASIC1.19□□□□□ -2.22
COPAP53621 SNORD115-2-201ENST00000362842 82 ntBASIC1.18□□□□□ -2.22
COPAP53621 Y_RNA.71-201ENST00000362892 104 ntBASIC1.18□□□□□ -2.22
COPAP53621 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
COPAP53621 Y_RNA.299-201ENST00000364973 94 ntBASIC1.18□□□□□ -2.22
COPAP53621 SNORD115-20-201ENST00000365099 82 ntBASIC1.18□□□□□ -2.22
COPAP53621 RNU6-580P-201ENST00000365159 107 ntBASIC1.18□□□□□ -2.22
COPAP53621 SNORA18-201ENST00000384416 132 ntBASIC1.18□□□□□ -2.22
COPAP53621 RNU6-1165P-201ENST00000410119 107 ntBASIC1.18□□□□□ -2.22
COPAP53621 RNU6-772P-201ENST00000516042 105 ntBASIC1.18□□□□□ -2.22
COPAP53621 RNU6-94P-201ENST00000607728 107 ntBASIC1.18□□□□□ -2.22
COPAP53621 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
COPAP53621 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COPAP53621 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
COPAP53621 Y_RNA.213-201ENST00000364178 111 ntBASIC1.17□□□□□ -2.22
COPAP53621 Y_RNA.218-201ENST00000364218 104 ntBASIC1.17□□□□□ -2.22
COPAP53621 SNORD58C-201ENST00000365223 64 ntBASIC1.17□□□□□ -2.22
COPAP53621 Y_RNA.470-201ENST00000384307 117 ntBASIC1.17□□□□□ -2.22
COPAP53621 snoU13.18-201ENST00000459483 104 ntBASIC1.17□□□□□ -2.22
COPAP53621 RNU6-781P-201ENST00000516377 101 ntBASIC1.17□□□□□ -2.22
COPAP53621 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
COPAP53621 MIR6767-201ENST00000637302 66 ntBASIC1.17□□□□□ -2.22
COPAP53621 SNORD116-14-201ENST00000383894 92 ntBASIC1.16□□□□□ -2.22
COPAP53621 SNORD116-17-201ENST00000383929 92 ntBASIC1.16□□□□□ -2.22
COPAP53621 SNORD116-15-201ENST00000384445 92 ntBASIC1.16□□□□□ -2.22
COPAP53621 SNORD116-19-201ENST00000384729 92 ntBASIC1.16□□□□□ -2.22
COPAP53621 RPL39P25-201ENST00000449384 154 ntBASIC1.16□□□□□ -2.22
COPAP53621 RNU7-107P-201ENST00000459121 61 ntBASIC1.16□□□□□ -2.22
COPAP53621 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
COPAP53621 AC025166.1-201ENST00000612411 163 ntBASIC1.16□□□□□ -2.22
COPAP53621 AL662814.1-201ENST00000617364 121 ntBASIC1.16□□□□□ -2.22
COPAP53621 Y_RNA.346-201ENST00000365385 112 ntBASIC1.15□□□□□ -2.23
COPAP53621 SNORA32-201ENST00000384072 121 ntBASIC1.15□□□□□ -2.23
COPAP53621 RNU6-342P-201ENST00000384521 104 ntBASIC1.15□□□□□ -2.23
COPAP53621 RNU6-1117P-201ENST00000384525 104 ntBASIC1.15□□□□□ -2.23
COPAP53621 Y_RNA.528-201ENST00000384575 108 ntBASIC1.15□□□□□ -2.23
COPAP53621 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
COPAP53621 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
COPAP53621 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
COPAP53621 AC008267.6-201ENST00000441664 139 ntBASIC1.15□□□□□ -2.23
COPAP53621 MIR18B-201ENST00000454574 71 ntBASIC1.15□□□□□ -2.23
COPAP53621 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
COPAP53621 COX6CP6-201ENST00000490840 228 ntBASIC1.15□□□□□ -2.23
COPAP53621 AC022523.2-201ENST00000561045 150 ntBASIC1.15□□□□□ -2.23
COPAP53621 MIR548AE2-201ENST00000583456 67 ntBASIC1.15□□□□□ -2.23
COPAP53621 AL157777.2-201ENST00000258070 137 ntBASIC1.14□□□□□ -2.23
COPAP53621 Y_RNA.198-201ENST00000364013 98 ntBASIC1.14□□□□□ -2.23
COPAP53621 MIR563-201ENST00000385080 79 ntBASIC1.14□□□□□ -2.23
COPAP53621 MT-TF-201ENST00000387314 71 ntBASIC1.14□□□□□ -2.23
COPAP53621 SNORD77B-201ENST00000391112 67 ntBASIC1.14□□□□□ -2.23
COPAP53621 RNU4-69P-201ENST00000410677 143 ntBASIC1.14□□□□□ -2.23
COPAP53621 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
COPAP53621 RNU6-1333P-201ENST00000516162 93 ntBASIC1.14□□□□□ -2.23
COPAP53621 RNU6-62P-201ENST00000516526 102 ntBASIC1.14□□□□□ -2.23
COPAP53621 Y_RNA.127-201ENST00000363386 109 ntBASIC1.13□□□□□ -2.23
COPAP53621 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
COPAP53621 RNU6-1086P-201ENST00000410930 100 ntBASIC1.13□□□□□ -2.23
COPAP53621 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
COPAP53621 AC141846.1-201ENST00000568348 142 ntBASIC1.13□□□□□ -2.23
COPAP53621 MIR3163-201ENST00000581592 73 ntBASIC1.13□□□□□ -2.23
COPAP53621 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
COPAP53621 RNU6-934P-201ENST00000365154 107 ntBASIC1.12□□□□□ -2.23
COPAP53621 RNU6-1104P-201ENST00000384723 104 ntBASIC1.12□□□□□ -2.23
COPAP53621 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
COPAP53621 MIRLET7F2-201ENST00000385277 83 ntBASIC1.12□□□□□ -2.23
COPAP53621 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
COPAP53621 RNU6-659P-201ENST00000516454 104 ntBASIC1.12□□□□□ -2.23
COPAP53621 RNU6-406P-201ENST00000516470 107 ntBASIC1.12□□□□□ -2.23
COPAP53621 Y_RNA.712-201ENST00000517011 92 ntBASIC1.12□□□□□ -2.23
COPAP53621 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
COPAP53621 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.12□□□□□ -2.23
COPAP53621 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COPAP53621 MTND5P18-201ENST00000445624 1801 ntBASIC1.12□□□□□ -2.23
COPAP53621 MIR30D-201ENST00000362283 70 ntBASIC1.11□□□□□ -2.23
COPAP53621 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.11□□□□□ -2.23
COPAP53621 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.11□□□□□ -2.23
COPAP53621 SNORD83.1-201ENST00000411362 77 ntBASIC1.11□□□□□ -2.23
COPAP53621 snoU13.21-201ENST00000459368 105 ntBASIC1.11□□□□□ -2.23
COPAP53621 RNU7-79P-201ENST00000516082 62 ntBASIC1.11□□□□□ -2.23
COPAP53621 RMST_2.1-201ENST00000617263 136 ntBASIC1.11□□□□□ -2.23
COPAP53621 MIR3914-2-201ENST00000637339 95 ntBASIC1.11□□□□□ -2.23
COPAP53621 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COPAP53621 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
COPAP53621 Y_RNA.525-201ENST00000384570 113 ntBASIC1.1□□□□□ -2.23
COPAP53621 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.1□□□□□ -2.23
COPAP53621 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
COPAP53621 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms