Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-240P-201ENST00000516098 97 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 AC021443.1-201ENST00000604478 211 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
NKX2-1P43699 MIR1-1-201ENST00000362147 71 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 Y_RNA.4-201ENST00000362333 112 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU6-508P-201ENST00000363231 103 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 MIR539-201ENST00000365690 78 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 Y_RNA.466-201ENST00000384294 113 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 MIR518E-201ENST00000385252 88 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 MIRLET7F2-201ENST00000385277 83 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 Y_RNA.586-201ENST00000391146 98 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 MIR1287-201ENST00000408492 90 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU7-164P-201ENST00000459221 62 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU7-113P-201ENST00000459273 62 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 snoU13.18-201ENST00000459483 104 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RN7SKP19-201ENST00000516016 252 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 RNU6-426P-201ENST00000516464 97 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 AC141846.1-201ENST00000568348 142 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 SNORA4-201ENST00000584302 138 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 AC108081.1-201ENST00000604358 221 ntBASIC0.77□□□□□ -2.29
NKX2-1P43699 Y_RNA.171-201ENST00000363760 102 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 RNU6-704P-201ENST00000364162 103 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 Y_RNA.366-201ENST00000365540 102 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
NKX2-1P43699 RNU6-257P-201ENST00000410238 98 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 AL512326.2-201ENST00000426359 151 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 uc_338.6-201ENST00000613544 171 ntBASIC0.76□□□□□ -2.29
NKX2-1P43699 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU6-392P-201ENST00000364926 101 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU6-42P-201ENST00000384165 107 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 Y_RNA.470-201ENST00000384307 117 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU7-123P-201ENST00000515911 60 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU7-79P-201ENST00000516082 62 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU6-346P-201ENST00000516288 111 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 SNORD92-201ENST00000585078 85 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 MIR6734-201ENST00000621166 68 ntBASIC0.75□□□□□ -2.29
NKX2-1P43699 RNU4-16P-201ENST00000364737 141 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 RNY1P13-201ENST00000365030 105 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 SNORA18-201ENST00000384416 132 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 MIR499A-201ENST00000384903 122 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 MIR125B2-201ENST00000385128 89 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 RNU4-69P-201ENST00000410677 143 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 AC096949.1-201ENST00000412047 152 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 RNU7-185P-201ENST00000459215 60 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 IGKV1-22-201ENST00000524313 326 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
NKX2-1P43699 SNORD114-10-201ENST00000363409 72 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 Y_RNA.198-201ENST00000364013 98 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNU6-81P-201ENST00000365608 104 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NKX2-1P43699 Y_RNA.508-201ENST00000384502 114 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 SNORD105-201ENST00000386910 85 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNA5SP237-201ENST00000410414 113 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
NKX2-1P43699 snoU13.21-201ENST00000459368 105 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNU6-1194P-201ENST00000516208 104 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 RNA5SP33-201ENST00000516687 98 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 MIR4676-201ENST00000583078 72 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 MIR3133-201ENST00000583157 78 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 AC020891.4-201ENST00000605745 93 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.73□□□□□ -2.29
NKX2-1P43699 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-342P-201ENST00000384521 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 U8.15-201ENST00000390947 134 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 MIR938-201ENST00000401216 83 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 MIR548M-201ENST00000408260 86 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-447P-201ENST00000410293 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-1118P-201ENST00000410382 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-1076P-201ENST00000410397 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-355P-201ENST00000410427 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-791P-201ENST00000410467 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-705P-201ENST00000410601 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-1100P-201ENST00000410691 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-860P-201ENST00000410860 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-1217P-201ENST00000411276 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-785P-201ENST00000411324 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RNU6-765P-201ENST00000516916 99 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 U6.90-201ENST00000614007 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 RMST_2.1-201ENST00000617263 136 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 U6.70-201ENST00000620287 104 ntBASIC0.72□□□□□ -2.29
NKX2-1P43699 SNORD115-19-201ENST00000363098 82 ntBASIC0.71□□□□□ -2.3
NKX2-1P43699 SNORD115-18-201ENST00000363293 82 ntBASIC0.71□□□□□ -2.3
NKX2-1P43699 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
NKX2-1P43699 Y_RNA.224-201ENST00000364308 111 ntBASIC0.71□□□□□ -2.3
NKX2-1P43699 SNORD115-17-201ENST00000364612 82 ntBASIC0.71□□□□□ -2.3
NKX2-1P43699 RNU6-80P-201ENST00000384195 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms