Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-243P-201ENST00000391140 107 ntBASIC-1.55□□□□□ -2.66
HTTP42858 MTND3P9-201ENST00000429526 346 ntBASIC-1.55□□□□□ -2.66
HTTP42858 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.55□□□□□ -2.66
HTTP42858 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-170P-201ENST00000362832 104 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-563P-201ENST00000364872 108 ntBASIC-1.55□□□□□ -2.66
HTTP42858 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.55□□□□□ -2.66
HTTP42858 MIR521-2-201ENST00000384818 87 ntBASIC-1.55□□□□□ -2.66
HTTP42858 MIR1-2-201ENST00000384961 85 ntBASIC-1.55□□□□□ -2.66
HTTP42858 SNORD115.1-201ENST00000391109 76 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNA5SP147-201ENST00000516493 109 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU7-137P-201ENST00000516788 62 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
HTTP42858 AC073534.2-201ENST00000620377 381 ntBASIC-1.55□□□□□ -2.66
HTTP42858 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.55□□□□□ -2.66
HTTP42858 MTND3P21-201ENST00000433774 331 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU7-106P-201ENST00000459514 67 ntBASIC-1.55□□□□□ -2.66
HTTP42858 HULC.1-201ENST00000612720 240 ntBASIC-1.55□□□□□ -2.66
HTTP42858 SEPT14P19-203ENST00000633205 211 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-899P-201ENST00000363947 107 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-560P-201ENST00000364007 108 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-169P-201ENST00000365336 107 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-246P-201ENST00000384702 107 ntBASIC-1.56□□□□□ -2.66
HTTP42858 MIR1284-201ENST00000408337 120 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-75P-201ENST00000515944 104 ntBASIC-1.56□□□□□ -2.66
HTTP42858 SNORA22.1-201ENST00000362701 134 ntBASIC-1.56□□□□□ -2.66
HTTP42858 MTCYBP36-201ENST00000404146 440 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.56□□□□□ -2.66
HTTP42858 AC104850.1-201ENST00000435940 476 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-719P-201ENST00000516671 104 ntBASIC-1.56□□□□□ -2.66
HTTP42858 AL158063.1-201ENST00000615349 536 ntBASIC-1.56□□□□□ -2.66
HTTP42858 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.56□□□□□ -2.66
HTTP42858 RNU6-495P-201ENST00000362995 107 ntBASIC-1.57□□□□□ -2.66
HTTP42858 snoU13.10-201ENST00000459301 103 ntBASIC-1.57□□□□□ -2.66
HTTP42858 AC021613.1-201ENST00000623880 111 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU4-17P-201ENST00000365598 141 ntBASIC-1.57□□□□□ -2.66
HTTP42858 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.57□□□□□ -2.66
HTTP42858 SNORD115-47-201ENST00000391226 86 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU6-710P-201ENST00000410424 105 ntBASIC-1.57□□□□□ -2.66
HTTP42858 CYP3A54P-201ENST00000566950 75 ntBASIC-1.57□□□□□ -2.66
HTTP42858 AC005357.1-201ENST00000588399 301 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU6-235P-201ENST00000362644 107 ntBASIC-1.57□□□□□ -2.66
HTTP42858 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU7-167P-201ENST00000459160 62 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU6-191P-201ENST00000516295 94 ntBASIC-1.57□□□□□ -2.66
HTTP42858 RNU6-850P-201ENST00000516934 103 ntBASIC-1.57□□□□□ -2.66
HTTP42858 AC006566.1-201ENST00000608943 513 ntBASIC-1.57□□□□□ -2.66
HTTP42858 AL021707.8-201ENST00000609428 183 ntBASIC-1.57□□□□□ -2.66
HTTP42858 U6.100-201ENST00000636230 99 ntBASIC-1.57□□□□□ -2.66
HTTP42858 MIR16-2-201ENST00000362117 81 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU6-433P-201ENST00000363216 104 ntBASIC-1.58□□□□□ -2.66
HTTP42858 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.58□□□□□ -2.66
HTTP42858 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU2-69P-201ENST00000516061 100 ntBASIC-1.58□□□□□ -2.66
HTTP42858 AC012414.2-201ENST00000559474 187 ntBASIC-1.58□□□□□ -2.66
HTTP42858 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.58□□□□□ -2.66
HTTP42858 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.58□□□□□ -2.66
HTTP42858 AL160004.2-201ENST00000432935 350 ntBASIC-1.58□□□□□ -2.66
HTTP42858 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU6-864P-201ENST00000516256 108 ntBASIC-1.58□□□□□ -2.66
HTTP42858 FTX_4.1-201ENST00000616291 147 ntBASIC-1.58□□□□□ -2.66
HTTP42858 RNU6-517P-201ENST00000384362 110 ntBASIC-1.59□□□□□ -2.66
HTTP42858 MIR516A2-201ENST00000384888 90 ntBASIC-1.59□□□□□ -2.66
HTTP42858 MIR516A1-201ENST00000385033 90 ntBASIC-1.59□□□□□ -2.66
HTTP42858 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.59□□□□□ -2.66
HTTP42858 AL359880.1-201ENST00000621879 266 ntBASIC-1.59□□□□□ -2.66
HTTP42858 RNU6-458P-201ENST00000384179 107 ntBASIC-1.59□□□□□ -2.66
HTTP42858 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.59□□□□□ -2.66
HTTP42858 MTCO2P21-201ENST00000419780 677 ntBASIC-1.59□□□□□ -2.66
HTTP42858 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.59□□□□□ -2.66
HTTP42858 U6.58-201ENST00000613107 107 ntBASIC-1.59□□□□□ -2.66
HTTP42858 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.6□□□□□ -2.66
HTTP42858 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.6□□□□□ -2.66
HTTP42858 RNU6-978P-201ENST00000364371 103 ntBASIC-1.6□□□□□ -2.66
HTTP42858 RNU6-20P-201ENST00000384106 107 ntBASIC-1.6□□□□□ -2.66
HTTP42858 MTND3P7-201ENST00000474435 343 ntBASIC-1.6□□□□□ -2.66
HTTP42858 SNORD67.1-201ENST00000516618 108 ntBASIC-1.6□□□□□ -2.66
HTTP42858 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RNU6-236P-201ENST00000363886 106 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RNU4-50P-201ENST00000364361 141 ntBASIC-1.6□□□□□ -2.67
HTTP42858 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.6□□□□□ -2.67
HTTP42858 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
HTTP42858 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.6□□□□□ -2.67
HTTP42858 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RNU6-224P-201ENST00000384055 107 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RNU6-281P-201ENST00000384212 103 ntBASIC-1.6□□□□□ -2.67
HTTP42858 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.6□□□□□ -2.67
HTTP42858 SNORA40.2-201ENST00000390847 128 ntBASIC-1.6□□□□□ -2.67
HTTP42858 AC112204.1-201ENST00000502591 103 ntBASIC-1.6□□□□□ -2.67
HTTP42858 AC048344.4-201ENST00000619744 527 ntBASIC-1.6□□□□□ -2.67
HTTP42858 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.61□□□□□ -2.67
HTTP42858 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.61□□□□□ -2.67
HTTP42858 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.61□□□□□ -2.67
HTTP42858 RNU6-790P-201ENST00000384479 105 ntBASIC-1.61□□□□□ -2.67
HTTP42858 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.61□□□□□ -2.67
HTTP42858 MIR6739-201ENST00000622461 75 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms