Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 SNORA32.3-201ENST00000384772 121 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.22□□□□□ -2.44
BRCA1P38398 RNU7-165P-201ENST00000458864 60 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 RNU2-60P-201ENST00000517290 128 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 RNU1-29P-201ENST00000606574 126 ntBASIC-0.22□□□□□ -2.44
BRCA1P38398 RNU6-756P-201ENST00000383997 107 ntBASIC-0.22□□□□□ -2.45
BRCA1P38398 BX276092.1-201ENST00000427368 251 ntBASIC-0.22□□□□□ -2.45
BRCA1P38398 RNY3P15-201ENST00000516297 97 ntBASIC-0.22□□□□□ -2.45
BRCA1P38398 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.22□□□□□ -2.45
BRCA1P38398 AL356055.1-201ENST00000602528 446 ntBASIC-0.22□□□□□ -2.45
BRCA1P38398 MIR367-201ENST00000362299 68 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 SNORA22B-201ENST00000383876 138 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 RNU6-651P-201ENST00000411040 105 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 AF228730.3-201ENST00000436691 102 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 MTND5P22-201ENST00000458380 195 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 RNU6-531P-201ENST00000516694 104 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 RNU6-570P-201ENST00000517051 105 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 AC138749.4-201ENST00000563970 127 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 AC141846.1-201ENST00000568348 142 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.23□□□□□ -2.45
BRCA1P38398 MIR4795-201ENST00000584182 89 ntBASIC-0.23□□□□□ -2.45
BRCA1P38398 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 SNORA72.6-201ENST00000384520 129 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 MIR635-201ENST00000384830 98 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNA5SP163-201ENST00000410304 99 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU7-161P-201ENST00000517289 62 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 DEFB131E-201ENST00000532329 154 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU6-326P-201ENST00000365480 107 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU6-211P-201ENST00000384047 107 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 MT-TQ-201ENST00000387372 72 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 MIR501-201ENST00000390204 84 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 MIR548AX-201ENST00000580117 73 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 MIR3925-201ENST00000584674 77 ntBASIC-0.24□□□□□ -2.45
BRCA1P38398 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 RNU6-450P-201ENST00000364654 107 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 RNU6-429P-201ENST00000384582 108 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 MIR1252-201ENST00000408861 65 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.25□□□□□ -2.45
BRCA1P38398 RNA5SP245-201ENST00000364239 121 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 RNY3P14-201ENST00000384309 102 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 PCNPP3-201ENST00000393579 471 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 RNU7-113P-201ENST00000459273 62 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 SNORA40.15-201ENST00000516884 107 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 AP003072.1-201ENST00000531740 145 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 AC113195.1-201ENST00000579952 141 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 MTND5P32-201ENST00000560711 1802 ntBASIC-0.26□□□□□ -2.45
BRCA1P38398 MIR335-201ENST00000362173 94 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 SNORA25.1-201ENST00000362326 128 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 RNU6-180P-201ENST00000516697 61 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 AC134503.1-201ENST00000633048 54 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 SNORD24-201ENST00000383884 75 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 RNU6-449P-201ENST00000383914 107 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 MIR624-201ENST00000385217 97 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 RNU6-127P-201ENST00000390897 107 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 RNA5SP33-201ENST00000516687 98 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 MIR5197-201ENST00000583721 112 ntBASIC-0.27□□□□□ -2.45
BRCA1P38398 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
BRCA1P38398 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 RNU4-17P-201ENST00000365598 141 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 RNY1P6-201ENST00000384193 109 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 AC113618.1-201ENST00000416747 285 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 SNORD2.1-201ENST00000458762 69 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms