Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MIR520F-201ENST00000384824 87 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 MIR520H-201ENST00000385126 88 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 MIR518E-201ENST00000385252 88 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 RNU6-1086P-201ENST00000410930 100 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 SNORA81.3-201ENST00000517283 198 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 AC141846.1-201ENST00000568348 142 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 AC011195.1-201ENST00000578177 177 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 AC008608.1-201ENST00000603910 127 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 RNU6-949P-201ENST00000384040 107 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 SNORA20-201ENST00000384662 132 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 Y_RNA.793-201ENST00000411222 111 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 RNU7-35P-201ENST00000517174 62 ntBASIC0.5□□□□□ -2.33
HMGCLP35914 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGCLP35914 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGCLP35914 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNY1P11-201ENST00000363759 113 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNU6-818P-201ENST00000364837 108 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 Y_RNA.357-201ENST00000365487 109 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 Y_RNA.580-201ENST00000391004 95 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 Y_RNA.588-201ENST00000391254 102 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 MIR1257-201ENST00000408490 117 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNU7-102P-201ENST00000458948 62 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 AC002350.1-201ENST00000490759 375 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNU7-70P-201ENST00000516941 66 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 DNAJC19P2-201ENST00000593340 302 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 AC004792.1-201ENST00000614523 137 ntBASIC0.49□□□□□ -2.33
HMGCLP35914 RNY1P13-201ENST00000365030 105 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 RNU7-197P-201ENST00000458836 62 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 RNU6-861P-201ENST00000516745 106 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 RNU7-156P-201ENST00000517214 74 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 MIR3612-201ENST00000579753 87 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 MIR6844-201ENST00000637122 62 ntBASIC0.48□□□□□ -2.33
HMGCLP35914 Y_RNA.120-201ENST00000363304 110 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-342P-201ENST00000384521 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-447P-201ENST00000410293 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-1118P-201ENST00000410382 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-1076P-201ENST00000410397 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-355P-201ENST00000410427 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-791P-201ENST00000410467 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-705P-201ENST00000410601 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-1100P-201ENST00000410691 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-860P-201ENST00000410860 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-1217P-201ENST00000411276 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-785P-201ENST00000411324 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 Y_RNA.651-201ENST00000459380 103 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 snoU13.18-201ENST00000459483 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 RNU6-765P-201ENST00000516916 99 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 U6.90-201ENST00000614007 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 U6.70-201ENST00000620287 104 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 MIR3658-201ENST00000636291 56 ntBASIC0.47□□□□□ -2.33
HMGCLP35914 Y_RNA.171-201ENST00000363760 102 ntBASIC0.46□□□□□ -2.34
HMGCLP35914 SNORA18-201ENST00000384416 132 ntBASIC0.46□□□□□ -2.34
HMGCLP35914 AL603914.1-201ENST00000401964 204 ntBASIC0.46□□□□□ -2.34
HMGCLP35914 RNU6-588P-201ENST00000410281 105 ntBASIC0.46□□□□□ -2.34
HMGCLP35914 RNU6-394P-201ENST00000410735 107 ntBASIC0.46□□□□□ -2.34
HMGCLP35914 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
HMGCLP35914 Y_RNA.272-201ENST00000364696 102 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 RNU4-16P-201ENST00000364737 141 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 Y_RNA.470-201ENST00000384307 117 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 PCNPP3-201ENST00000393579 471 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 MTATP6P21-201ENST00000440681 189 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 Y_RNA.662-201ENST00000516028 97 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 RNU6-448P-201ENST00000517052 107 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
HMGCLP35914 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
HMGCLP35914 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 RNU6-364P-201ENST00000384387 107 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 RNA5SP237-201ENST00000410414 113 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 RNU2-35P-201ENST00000516446 142 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 MIR4491-201ENST00000581087 68 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 MIR4305-201ENST00000583252 102 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 MIR6082-201ENST00000613604 109 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 FTX_2.1-201ENST00000618816 94 ntBASIC0.44□□□□□ -2.34
HMGCLP35914 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 Y_RNA.531-201ENST00000384589 121 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HMGCLP35914 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 RNU4-83P-201ENST00000410863 133 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 AL512326.2-201ENST00000426359 151 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 MIR1270-201ENST00000459320 83 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms