Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC019235.1-201ENST00000503847 207 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNA5SP476-201ENST00000516613 103 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU6-126P-201ENST00000516685 103 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 MIR548AE2-201ENST00000583456 67 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 AC124864.2-201ENST00000624736 186 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RNA5SP144-201ENST00000410846 116 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.57□□□□□ -2.66
SDC4P31431 AC096644.2-201ENST00000429278 159 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RPS3AP52-201ENST00000435639 297 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 SNORD18.2-201ENST00000459604 70 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RNU6-764P-201ENST00000516396 105 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 snoU83B.1-201ENST00000517136 88 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RNY1P9-201ENST00000532431 109 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 AC005899.2-201ENST00000584353 90 ntBASIC-1.57□□□□□ -2.66
SDC4P31431 RNU6-170P-201ENST00000362832 104 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 RNU6-893P-201ENST00000458841 100 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 RNU6-956P-201ENST00000458868 103 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 MIR5692C2-201ENST00000577959 77 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 MIR4306-201ENST00000583390 91 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 AL008718.3-201ENST00000610217 321 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 U2.1-201ENST00000618978 145 ntBASIC-1.58□□□□□ -2.66
SDC4P31431 MTND5P26-201ENST00000426018 1752 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 SNORD115-2-201ENST00000362842 82 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 SNORD114-17-201ENST00000364699 75 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 RNU6-937P-201ENST00000384325 106 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 MIR548F5-201ENST00000408421 86 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 MRPS35P2-201ENST00000508242 191 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 RNU7-70P-201ENST00000516941 66 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 AC133104.2-201ENST00000615272 193 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 AL603755.1-201ENST00000619504 163 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 AC138305.3-201ENST00000624988 240 ntBASIC-1.59□□□□□ -2.66
SDC4P31431 SNORD115-20-201ENST00000365099 82 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 RNU6-21P-201ENST00000384710 107 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 MIR548E-201ENST00000408287 88 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 AC119751.7-201ENST00000600494 245 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 AC097639.2-201ENST00000603159 172 ntBASIC-1.6□□□□□ -2.67
SDC4P31431 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 RNU6-593P-201ENST00000364716 112 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 MIR548K-201ENST00000408406 116 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.61□□□□□ -2.67
SDC4P31431 AL161932.1-201ENST00000437408 146 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 MTND1P34-201ENST00000438556 671 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 SNRPGP8-201ENST00000454064 226 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 RNU7-48P-201ENST00000458875 63 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 AC144568.1-201ENST00000520139 137 ntBASIC-1.61□□□□□ -2.67
SDC4P31431 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 RNU6-592P-201ENST00000411333 103 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 RNU6-507P-201ENST00000516045 100 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 SCARNA15-202ENST00000516881 127 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 AL442663.2-201ENST00000554385 511 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 PISRT1.1-201ENST00000616930 107 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.62□□□□□ -2.67
SDC4P31431 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 MIR516A2-201ENST00000384888 90 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 MIR516A1-201ENST00000385033 90 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 PMCHL1-202ENST00000423102 261 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 RNA5SP153-201ENST00000516498 76 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 RNU6-762P-201ENST00000517107 102 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.63□□□□□ -2.67
SDC4P31431 AC007485.1-201ENST00000616755 206 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 AP000720.1-201ENST00000625091 483 ntBASIC-1.63□□□□□ -2.67
SDC4P31431 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 MIR206-201ENST00000384872 86 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 MIR124-2-201ENST00000385081 109 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 MIR628-201ENST00000385229 95 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 AC082651.2-201ENST00000496833 166 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 RNA5SP67-201ENST00000516422 131 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 RNU7-4P-201ENST00000516961 62 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 U6.100-201ENST00000636230 99 ntBASIC-1.64□□□□□ -2.67
SDC4P31431 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 RNY3-201ENST00000365484 102 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 MIR587-201ENST00000384845 96 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 MT-TT-201ENST00000387460 66 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 DEFB108C-201ENST00000400154 252 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 RNU7-134P-201ENST00000458997 64 ntBASIC-1.65□□□□□ -2.67
SDC4P31431 RNU6-307P-201ENST00000516743 106 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms