Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
HOXA11P31270 RNU6-94P-201ENST00000607728 107 ntBASIC1.32□□□□□ -2.2
HOXA11P31270 Y_RNA.323-201ENST00000365157 109 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 MIR548D2-201ENST00000384955 97 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 MIR548A1-201ENST00000385041 97 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 RNU6-602P-201ENST00000411155 105 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 RPL39P34-201ENST00000477141 156 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 PDCD5P2-201ENST00000507570 312 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 RNU6-922P-201ENST00000516753 99 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
HOXA11P31270 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HOXA11P31270 Y_RNA.171-201ENST00000363760 102 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 RNU6-153P-201ENST00000364422 104 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 SNORA1.1-201ENST00000364671 133 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 Y_RNA.354-201ENST00000365448 111 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 Y_RNA.362-201ENST00000365518 110 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 MIR759-201ENST00000390224 91 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.3□□□□□ -2.2
HOXA11P31270 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 AC087741.2-201ENST00000619415 172 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 AL035470.1-201ENST00000622571 220 ntBASIC1.3□□□□□ -2.2
HOXA11P31270 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 Y_RNA.344-201ENST00000365381 112 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 Y_RNA.470-201ENST00000384307 117 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 RNU4-69P-201ENST00000410677 143 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 HMGN1P33-201ENST00000432945 451 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 RNU7-113P-201ENST00000459273 62 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 MIR1270-201ENST00000459320 83 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 AL133373.1-201ENST00000497098 94 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.29□□□□□ -2.2
HOXA11P31270 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
HOXA11P31270 Y_RNA.549-201ENST00000384657 102 ntBASIC1.28□□□□□ -2.2
HOXA11P31270 SNORD12C-201ENST00000386307 89 ntBASIC1.28□□□□□ -2.2
HOXA11P31270 MT-TN-201ENST00000387400 73 ntBASIC1.28□□□□□ -2.2
HOXA11P31270 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
HOXA11P31270 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
HOXA11P31270 RNU6-1107P-201ENST00000364817 104 ntBASIC1.27□□□□□ -2.21
HOXA11P31270 RNU6-106P-201ENST00000384405 107 ntBASIC1.27□□□□□ -2.21
HOXA11P31270 AC090844.1-201ENST00000422019 156 ntBASIC1.27□□□□□ -2.21
HOXA11P31270 RNU7-35P-201ENST00000517174 62 ntBASIC1.27□□□□□ -2.21
HOXA11P31270 PRELID3BP2-201ENST00000605362 201 ntBASIC1.27□□□□□ -2.21
HOXA11P31270 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
HOXA11P31270 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 Y_RNA.49-201ENST00000362714 112 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 SNORA22-201ENST00000383907 134 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 RNU6-1086P-201ENST00000410930 100 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 AC244023.1-201ENST00000426884 112 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 MIR548AE2-201ENST00000583456 67 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 AC242498.1-201ENST00000604134 111 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 AL162726.3-218ENST00000636401 95 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 AL589743.1-201ENST00000551932 2712 ntBASIC1.26□□□□□ -2.21
HOXA11P31270 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 SNORD38B-201ENST00000384690 67 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 MIR563-201ENST00000385080 79 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HOXA11P31270 RPL39P39-201ENST00000455840 151 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 RNA5SP33-201ENST00000516687 98 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 SNORD38B-202ENST00000625943 69 ntBASIC1.25□□□□□ -2.21
HOXA11P31270 SNORA63.4-201ENST00000362763 126 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 U8.6-201ENST00000364939 135 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 Y_RNA.309-201ENST00000365046 111 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 RNU6-1014P-201ENST00000383940 103 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 MIR1912-201ENST00000410389 80 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 RNU6-613P-201ENST00000410412 108 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 RNU7-6P-201ENST00000516845 62 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 AC068339.1-201ENST00000526965 141 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 MIR5009-201ENST00000578736 100 ntBASIC1.24□□□□□ -2.21
HOXA11P31270 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HOXA11P31270 RNU6-363P-201ENST00000362895 105 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 Y_RNA.78-201ENST00000362970 110 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 Y_RNA.116-201ENST00000363292 103 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 MIR4264-201ENST00000583520 66 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 Y_RNA.773-201ENST00000607168 90 ntBASIC1.23□□□□□ -2.21
HOXA11P31270 SNORA63.5-201ENST00000363548 123 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 Y_RNA.163-201ENST00000363702 113 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 RNU6-396P-201ENST00000365369 105 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 RNU6-147P-201ENST00000383983 107 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 RNU6-342P-201ENST00000384521 104 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 RNU6-554P-201ENST00000410466 106 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
HOXA11P31270 snoU13.2-201ENST00000459201 104 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 MIR2115-201ENST00000516657 100 ntBASIC1.22□□□□□ -2.21
HOXA11P31270 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms