Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNRPGP8-201ENST00000454064 226 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 RNU7-137P-201ENST00000516788 62 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.92□□□□□ -2.56
HLA-DMBP28068 MIR3129-201ENST00000581095 76 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 AC025253.1-201ENST00000613623 543 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 MIR1277-201ENST00000408536 78 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 RNU6-130P-201ENST00000411112 103 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.93□□□□□ -2.56
HLA-DMBP28068 HSPE1P25-201ENST00000455484 251 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 TRAJ51-201ENST00000504127 63 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 RNU6-507P-201ENST00000516045 100 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 SNORD116.3-201ENST00000517176 78 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 AC093726.3-201ENST00000637588 150 ntBASIC-0.93□□□□□ -2.56
HLA-DMBP28068 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 RNU4-10P-201ENST00000364383 140 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 RNU6-455P-201ENST00000384681 107 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 RNA5SP266-201ENST00000410273 108 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 AC040926.1-201ENST00000530195 238 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 RNY1P9-201ENST00000532431 109 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 AC006006.1-201ENST00000603082 144 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 PART1_1.1-201ENST00000611761 217 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 AL627230.5-201ENST00000619807 58 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 AC022079.1-201ENST00000621546 602 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 uc_338.10-201ENST00000621872 182 ntBASIC-0.94□□□□□ -2.56
HLA-DMBP28068 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 SNORD113-8-201ENST00000363497 74 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 SNORD114-29-201ENST00000364819 70 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 RNU6-102P-201ENST00000384485 104 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 MIR196A1-201ENST00000388006 70 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 SNORA53-201ENST00000391141 249 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 RNU6-175P-201ENST00000516896 107 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 RNU7-70P-201ENST00000516941 66 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 MTND5P40-201ENST00000559945 246 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 MIR4473-201ENST00000583731 91 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 AL365205.2-201ENST00000594586 68 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.95□□□□□ -2.56
HLA-DMBP28068 AC069503.3-201ENST00000618674 145 ntBASIC-0.95□□□□□ -2.56
HLA-DMBP28068 RNU6-845P-201ENST00000362578 103 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 SNORD115-2-201ENST00000362842 82 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 SNORD114-10-201ENST00000363409 72 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 SNORD115-20-201ENST00000365099 82 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 MIR519A1-201ENST00000385257 85 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 AL731563.1-201ENST00000442202 214 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 RNU7-13P-201ENST00000516413 62 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 RNU6-358P-201ENST00000516564 75 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 AL008718.3-201ENST00000610217 321 ntBASIC-0.96□□□□□ -2.56
HLA-DMBP28068 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 RNU4-90P-201ENST00000362773 141 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 RNU4-24P-201ENST00000364565 139 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 MIR9-2-201ENST00000384838 87 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HLA-DMBP28068 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HLA-DMBP28068 AC093423.1-201ENST00000440817 142 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 RNU6-720P-201ENST00000516363 108 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 SNORD67.1-201ENST00000516618 108 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 SNORA20.3-201ENST00000516880 132 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.56
HLA-DMBP28068 AL359881.1-201ENST00000602916 267 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 AL606534.2-204ENST00000635008 178 ntBASIC-0.97□□□□□ -2.56
HLA-DMBP28068 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 RNU4-16P-201ENST00000364737 141 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 RNA5SP331-201ENST00000364986 107 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 RNU1-115P-201ENST00000365329 160 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 MIR539-201ENST00000365690 78 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 SPINT5P-201ENST00000448174 155 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 SNORD57-201ENST00000448188 72 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 MTND4LP30-201ENST00000454092 297 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 AC069439.1-201ENST00000494739 167 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 AC021146.6-201ENST00000514659 117 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 RNU6-559P-201ENST00000516151 98 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 SCARNA15-202ENST00000516881 127 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 SNORD58B-201ENST00000607313 66 ntBASIC-0.98□□□□□ -2.57
HLA-DMBP28068 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 MIR587-201ENST00000384845 96 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 SNORD83B-201ENST00000386745 93 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 RNA5SP144-201ENST00000410846 116 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 AC113139.1-201ENST00000605049 239 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.99□□□□□ -2.57
HLA-DMBP28068 snoU18.1-201ENST00000629629 71 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms