Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 MIR4498-201ENST00000577599 66 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 MIR3664-201ENST00000579074 99 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 MIR4264-201ENST00000583520 66 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 AC242498.1-201ENST00000604134 111 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATP2B4P23634 MIR103A2-201ENST00000362154 78 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 RNU6-1313P-201ENST00000362622 102 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 Y_RNA.93-201ENST00000363066 109 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 SNORD114-10-201ENST00000363409 72 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 Y_RNA.377-201ENST00000365644 108 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 MT-TN-201ENST00000387400 73 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 AP003716.2-201ENST00000528260 108 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.23□□□□□ -2.05
ATP2B4P23634 AL662814.1-201ENST00000617364 121 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 AL359851.1-201ENST00000569460 4997 ntBASIC2.23□□□□□ -2.05
ATP2B4P23634 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.23□□□□□ -2.05
ATP2B4P23634 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.22□□□□□ -2.05
ATP2B4P23634 Y_RNA.107-201ENST00000363190 121 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 RNU6-1201P-201ENST00000384227 107 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 RNY4P30-201ENST00000410216 95 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 AC141846.1-201ENST00000568348 142 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
ATP2B4P23634 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATP2B4P23634 RNA5SP264-201ENST00000363115 107 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 MIR588-201ENST00000384900 83 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 MIR514B-201ENST00000516774 80 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 RNU7-137P-201ENST00000516788 62 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 AL512310.8-201ENST00000550183 120 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 MIR4422-201ENST00000581938 83 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 AC096720.1-201ENST00000604441 183 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
ATP2B4P23634 Y_RNA.4-201ENST00000362333 112 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNY1P13-201ENST00000365030 105 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU1-78P-201ENST00000391248 165 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-447P-201ENST00000410293 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-1118P-201ENST00000410382 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-1076P-201ENST00000410397 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-355P-201ENST00000410427 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-791P-201ENST00000410467 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-705P-201ENST00000410601 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-1100P-201ENST00000410691 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-860P-201ENST00000410860 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-1217P-201ENST00000411276 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 RNU6-785P-201ENST00000411324 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 AC108729.3-201ENST00000513484 108 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 MIR4255-201ENST00000579351 72 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 U6.90-201ENST00000614007 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 AL442128.1-201ENST00000615151 90 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 U6.70-201ENST00000620287 104 ntBASIC2.2□□□□□ -2.06
ATP2B4P23634 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ATP2B4P23634 SNORD45B-201ENST00000364617 72 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 RNU6-865P-201ENST00000364772 107 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 Y_RNA.448-201ENST00000384185 108 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ATP2B4P23634 MIR1185-1-201ENST00000408598 86 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 MTATP8P2-201ENST00000435212 202 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 AC245517.4-201ENST00000448601 281 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.19□□□□□ -2.06
ATP2B4P23634 MIR5582-201ENST00000579697 68 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 MIR6516-201ENST00000630554 81 ntBASIC2.19□□□□□ -2.06
ATP2B4P23634 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
ATP2B4P23634 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B4P23634 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B4P23634 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
ATP2B4P23634 RNU6-1053P-201ENST00000515930 101 ntBASIC2.18□□□□□ -2.06
ATP2B4P23634 RNU6-165P-201ENST00000517170 99 ntBASIC2.18□□□□□ -2.06
ATP2B4P23634 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B4P23634 MIR377-201ENST00000362145 69 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 RNU6-613P-201ENST00000410412 108 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 AC006254.2-201ENST00000603259 279 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 snoU13.31-201ENST00000607291 104 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 AC105081.1-201ENST00000617727 106 ntBASIC2.17□□□□□ -2.06
ATP2B4P23634 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATP2B4P23634 MIR378A-201ENST00000362177 66 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 SNORA16.1-201ENST00000364597 132 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 Y_RNA.369-201ENST00000365568 117 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 Y_RNA.466-201ENST00000384294 113 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 MIR563-201ENST00000385080 79 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 RNU6-205P-201ENST00000390858 107 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 RNU6-1321P-201ENST00000390905 107 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 RNU7-62P-201ENST00000458856 62 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 Y_RNA.659-201ENST00000515994 113 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 MIR502-201ENST00000606349 86 ntBASIC2.16□□□□□ -2.06
ATP2B4P23634 AL161722.3-201ENST00000605789 2983 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 Y_RNA.164-201ENST00000363709 102 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 RNU6-949P-201ENST00000384040 107 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 RNU6-1307P-201ENST00000391012 103 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 SNORA67.5-201ENST00000391036 107 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 RNU6-1165P-201ENST00000410119 107 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 RPS27P16-201ENST00000425758 201 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.15□□□□□ -2.07
ATP2B4P23634 MIR6740-201ENST00000618268 113 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
ATP2B4P23634 RNU6-170P-201ENST00000362832 104 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms