Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
BDNFP23560 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
BDNFP23560 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
BDNFP23560 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
BDNFP23560 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.05□□□□□ -2.4
BDNFP23560 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
BDNFP23560 MIR4744-201ENST00000581563 82 ntBASIC0.05□□□□□ -2.4
BDNFP23560 RNU6-978P-201ENST00000364371 103 ntBASIC0.04□□□□□ -2.4
BDNFP23560 RNU6-1227P-201ENST00000383981 107 ntBASIC0.04□□□□□ -2.4
BDNFP23560 Y_RNA.422-201ENST00000384054 114 ntBASIC0.04□□□□□ -2.4
BDNFP23560 Y_RNA.483-201ENST00000384380 101 ntBASIC0.04□□□□□ -2.4
BDNFP23560 SNORA18-201ENST00000384416 132 ntBASIC0.04□□□□□ -2.4
BDNFP23560 Y_RNA.512-201ENST00000384518 102 ntBASIC0.04□□□□□ -2.4
BDNFP23560 MT-TW-201ENST00000387382 68 ntBASIC0.04□□□□□ -2.4
BDNFP23560 RNU6-1086P-201ENST00000410930 100 ntBASIC0.04□□□□□ -2.4
BDNFP23560 AL121914.1-201ENST00000450188 156 ntBASIC0.04□□□□□ -2.4
BDNFP23560 RNU6-635P-201ENST00000516651 102 ntBASIC0.04□□□□□ -2.4
BDNFP23560 SCARNA15-202ENST00000516881 127 ntBASIC0.04□□□□□ -2.4
BDNFP23560 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
BDNFP23560 MIR378D2-201ENST00000580636 98 ntBASIC0.04□□□□□ -2.4
BDNFP23560 RNY1P13-201ENST00000365030 105 ntBASIC0.03□□□□□ -2.4
BDNFP23560 Y_RNA.352-201ENST00000365439 102 ntBASIC0.03□□□□□ -2.4
BDNFP23560 SNORA72.6-201ENST00000384520 129 ntBASIC0.03□□□□□ -2.4
BDNFP23560 Y_RNA.539-201ENST00000384635 107 ntBASIC0.03□□□□□ -2.4
BDNFP23560 RNU6-291P-201ENST00000384720 107 ntBASIC0.03□□□□□ -2.4
BDNFP23560 MIR624-201ENST00000385217 97 ntBASIC0.03□□□□□ -2.4
BDNFP23560 AC069271.1-201ENST00000445577 156 ntBASIC0.03□□□□□ -2.4
BDNFP23560 RNA5SP227-201ENST00000516184 113 ntBASIC0.03□□□□□ -2.4
BDNFP23560 RNA5SP47-201ENST00000517230 109 ntBASIC0.03□□□□□ -2.4
BDNFP23560 MIR4639-201ENST00000584938 69 ntBASIC0.03□□□□□ -2.4
BDNFP23560 AC011921.3-201ENST00000605540 361 ntBASIC0.03□□□□□ -2.4
BDNFP23560 MIR7107-201ENST00000611489 80 ntBASIC0.03□□□□□ -2.4
BDNFP23560 AL442067.1-201ENST00000613261 223 ntBASIC0.03□□□□□ -2.4
BDNFP23560 AC091304.10-201ENST00000641554 121 ntBASIC0.03□□□□□ -2.4
BDNFP23560 Y_RNA.412-201ENST00000384001 104 ntBASIC0.02□□□□□ -2.41
BDNFP23560 Y_RNA.461-201ENST00000384263 103 ntBASIC0.02□□□□□ -2.41
BDNFP23560 SNORD28-201ENST00000384706 75 ntBASIC0.02□□□□□ -2.41
BDNFP23560 RNU6-535P-201ENST00000384722 107 ntBASIC0.02□□□□□ -2.41
BDNFP23560 Y_RNA.697-201ENST00000516776 113 ntBASIC0.02□□□□□ -2.41
BDNFP23560 MIR4643-201ENST00000577473 78 ntBASIC0.02□□□□□ -2.41
BDNFP23560 MIR6755-201ENST00000619993 66 ntBASIC0.02□□□□□ -2.41
BDNFP23560 RNU6-238P-201ENST00000363313 106 ntBASIC0.01□□□□□ -2.41
BDNFP23560 Y_RNA.292-201ENST00000364904 97 ntBASIC0.01□□□□□ -2.41
BDNFP23560 RNU6-578P-201ENST00000390980 103 ntBASIC0.01□□□□□ -2.41
BDNFP23560 SUMO1P3-201ENST00000439961 304 ntBASIC0.01□□□□□ -2.41
BDNFP23560 RNU6-1194P-201ENST00000516208 104 ntBASIC0.01□□□□□ -2.41
BDNFP23560 SNORA25.16-201ENST00000516741 121 ntBASIC0.01□□□□□ -2.41
BDNFP23560 RNU6-1149P-201ENST00000516810 97 ntBASIC0.01□□□□□ -2.41
BDNFP23560 MTND5P34-201ENST00000568888 325 ntBASIC0.01□□□□□ -2.41
BDNFP23560 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
BDNFP23560 Y_RNA.757-201ENST00000578934 114 ntBASIC0.01□□□□□ -2.41
BDNFP23560 AC067863.3-201ENST00000624172 122 ntBASIC0.01□□□□□ -2.41
BDNFP23560 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
BDNFP23560 Y_RNA.76-201ENST00000362931 109 ntBASIC0□□□□□ -2.41
BDNFP23560 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
BDNFP23560 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
BDNFP23560 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
BDNFP23560 RNU6-472P-201ENST00000384299 107 ntBASIC0□□□□□ -2.41
BDNFP23560 Y_RNA.574-201ENST00000384766 95 ntBASIC0□□□□□ -2.41
BDNFP23560 Y_RNA.604-201ENST00000410574 102 ntBASIC0□□□□□ -2.41
BDNFP23560 MTATP8P1-201ENST00000467115 207 ntBASIC0□□□□□ -2.41
BDNFP23560 RNA5SP285-201ENST00000516619 119 ntBASIC0□□□□□ -2.41
BDNFP23560 Y_RNA.720-201ENST00000517166 92 ntBASIC0□□□□□ -2.41
BDNFP23560 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU4-16P-201ENST00000364737 141 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU4-70P-201ENST00000384579 139 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 MIR329-2-201ENST00000385029 84 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU7-79P-201ENST00000516082 62 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU7-35P-201ENST00000517174 62 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 AP003072.1-201ENST00000531740 145 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 AC244669.1-204ENST00000621564 178 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 MTND5P32-201ENST00000560711 1802 ntBASIC-0.01□□□□□ -2.41
BDNFP23560 RNU4-58P-201ENST00000363192 141 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 RNY1P6-201ENST00000384193 109 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.02□□□□□ -2.41
BDNFP23560 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 SNORA25.7-201ENST00000364375 127 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 RNY4P28-201ENST00000365281 93 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 RNU6-643P-201ENST00000384018 107 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 MIR548F4-201ENST00000408515 105 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 RNA5SP144-201ENST00000410846 116 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 DEFB131E-201ENST00000532329 154 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 AC006504.6-201ENST00000590142 199 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 RNU2-4P-201ENST00000606190 192 ntBASIC-0.03□□□□□ -2.41
BDNFP23560 SNORD115-2-201ENST00000362842 82 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms