Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.14□□□□□ -2.59
CCL1P22362 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.14□□□□□ -2.59
CCL1P22362 MIR548I2-201ENST00000408348 149 ntBASIC-1.14□□□□□ -2.59
CCL1P22362 SNORD67.1-201ENST00000516618 108 ntBASIC-1.14□□□□□ -2.59
CCL1P22362 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 RNU6-900P-201ENST00000384498 102 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 MIR9-2-201ENST00000384838 87 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 HSPE1P25-201ENST00000455484 251 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 RNA5SP33-201ENST00000516687 98 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 RNU6-175P-201ENST00000516896 107 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 YWHAEP2-201ENST00000580066 112 ntBASIC-1.15□□□□□ -2.59
CCL1P22362 RNU6-845P-201ENST00000362578 103 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNU4-10P-201ENST00000364383 140 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNU4-16P-201ENST00000364737 141 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 MIR539-201ENST00000365690 78 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNU6-901P-201ENST00000384593 106 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
CCL1P22362 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 Z95118.1-201ENST00000421372 247 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNA5SP169-201ENST00000517268 117 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 AC037487.3-201ENST00000606668 112 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 AL606534.2-204ENST00000635008 178 ntBASIC-1.16□□□□□ -2.6
CCL1P22362 RNU1-115P-201ENST00000365329 160 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 RNA5SP144-201ENST00000410846 116 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 RNU6-559P-201ENST00000516151 98 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 RNU6-758P-201ENST00000516292 89 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 RNU6-358P-201ENST00000516564 75 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
CCL1P22362 AC108676.2-201ENST00000605225 163 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 MIR376A1-201ENST00000616574 68 ntBASIC-1.17□□□□□ -2.6
CCL1P22362 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 MIR617-201ENST00000385030 97 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 SNORA79-201ENST00000408376 140 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 AC093423.1-201ENST00000440817 142 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 AC113139.1-201ENST00000605049 239 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 AL008718.3-201ENST00000610217 321 ntBASIC-1.18□□□□□ -2.6
CCL1P22362 RNU6-502P-201ENST00000362419 108 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 SNORD95.1-201ENST00000364099 68 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 SNORD115-44-201ENST00000365391 82 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 SNORA32-201ENST00000384072 121 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 RNU6-154P-201ENST00000384306 106 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 AL445193.1-201ENST00000441183 141 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 RNU6-881P-201ENST00000516813 102 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.19□□□□□ -2.6
CCL1P22362 MIR4500-201ENST00000579472 76 ntBASIC-1.19□□□□□ -2.6
CCL1P22362 MIR20A-201ENST00000362279 71 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 SNORA25.1-201ENST00000362326 128 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 RNY1P6-201ENST00000384193 109 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 RNU6-130P-201ENST00000411112 103 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 AL359881.1-201ENST00000602916 267 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 PART1_1.1-201ENST00000611761 217 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 snoU18.1-201ENST00000629629 71 ntBASIC-1.2□□□□□ -2.6
CCL1P22362 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 RNU6-326P-201ENST00000365480 107 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 RNU6-662P-201ENST00000384253 104 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 RNU6-102P-201ENST00000384485 104 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 MIR519E-201ENST00000385075 84 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 AL606845.1-201ENST00000404881 255 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 SNORA27.4-201ENST00000516650 95 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 SCARNA15-202ENST00000516881 127 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 MIR4460-201ENST00000577862 86 ntBASIC-1.21□□□□□ -2.6
CCL1P22362 RNU4-36P-201ENST00000364294 144 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 RNU6-720P-201ENST00000516363 108 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 MIR6851-201ENST00000617060 67 ntBASIC-1.22□□□□□ -2.6
CCL1P22362 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 RNU4-24P-201ENST00000364565 139 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 RNU6-290P-201ENST00000365212 101 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 MIR616-201ENST00000385293 97 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 MT-TT-201ENST00000387460 66 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 SNORD115-46-201ENST00000390982 71 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.23□□□□□ -2.61
CCL1P22362 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCL1P22362 RNU7-195P-201ENST00000458793 62 ntBASIC-1.23□□□□□ -2.61
CCL1P22362 AC074198.2-201ENST00000508153 258 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms