Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU6-860P-201ENST00000410860 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-1217P-201ENST00000411276 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-785P-201ENST00000411324 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RN7SL274P-201ENST00000492268 272 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU7-41P-201ENST00000515917 61 ntBASIC2.23□□□□□ -2.05
LIG1P18858 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
LIG1P18858 U6.90-201ENST00000614007 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LIG1P18858 MIR376B-201ENST00000614515 100 ntBASIC2.23□□□□□ -2.05
LIG1P18858 U6.70-201ENST00000620287 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 SNORD38B-202ENST00000625943 69 ntBASIC2.23□□□□□ -2.05
LIG1P18858 MIR1245B-201ENST00000636115 69 ntBASIC2.23□□□□□ -2.05
LIG1P18858 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LIG1P18858 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LIG1P18858 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LIG1P18858 SNORD114-1-201ENST00000362705 72 ntBASIC2.22□□□□□ -2.05
LIG1P18858 Y_RNA.190-201ENST00000363964 101 ntBASIC2.22□□□□□ -2.05
LIG1P18858 RNU6-1275P-201ENST00000391087 107 ntBASIC2.22□□□□□ -2.05
LIG1P18858 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.22□□□□□ -2.05
LIG1P18858 MIR1289-2-201ENST00000408360 111 ntBASIC2.22□□□□□ -2.05
LIG1P18858 AC109327.2-201ENST00000448339 378 ntBASIC2.22□□□□□ -2.05
LIG1P18858 RNU6-675P-201ENST00000384236 104 ntBASIC2.21□□□□□ -2.06
LIG1P18858 snoU13.15-201ENST00000459407 104 ntBASIC2.21□□□□□ -2.06
LIG1P18858 RNU7-137P-201ENST00000516788 62 ntBASIC2.21□□□□□ -2.06
LIG1P18858 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.21□□□□□ -2.06
LIG1P18858 SNORD116-10-201ENST00000363791 102 ntBASIC2.2□□□□□ -2.06
LIG1P18858 Y_RNA.219-201ENST00000364232 113 ntBASIC2.2□□□□□ -2.06
LIG1P18858 RNY1P1-201ENST00000364372 112 ntBASIC2.2□□□□□ -2.06
LIG1P18858 RNU6-1163P-201ENST00000364516 107 ntBASIC2.2□□□□□ -2.06
LIG1P18858 SNORD58A-201ENST00000383875 65 ntBASIC2.2□□□□□ -2.06
LIG1P18858 SNORD116-22-201ENST00000384430 92 ntBASIC2.2□□□□□ -2.06
LIG1P18858 MIR34C-201ENST00000384831 77 ntBASIC2.2□□□□□ -2.06
LIG1P18858 MIR504-201ENST00000385065 83 ntBASIC2.2□□□□□ -2.06
LIG1P18858 MIR513A1-201ENST00000385138 129 ntBASIC2.2□□□□□ -2.06
LIG1P18858 U8.15-201ENST00000390947 134 ntBASIC2.2□□□□□ -2.06
LIG1P18858 AC019129.1-201ENST00000403786 261 ntBASIC2.2□□□□□ -2.06
LIG1P18858 AC008834.1-201ENST00000511612 175 ntBASIC2.2□□□□□ -2.06
LIG1P18858 Y_RNA.685-201ENST00000516532 108 ntBASIC2.2□□□□□ -2.06
LIG1P18858 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.2□□□□□ -2.06
LIG1P18858 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
LIG1P18858 IGLL4P-201ENST00000614590 133 ntBASIC2.2□□□□□ -2.06
LIG1P18858 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LIG1P18858 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LIG1P18858 RNA5SP48-201ENST00000363969 126 ntBASIC2.19□□□□□ -2.06
LIG1P18858 RNA5SP259-201ENST00000365541 109 ntBASIC2.19□□□□□ -2.06
LIG1P18858 Y_RNA.448-201ENST00000384185 108 ntBASIC2.19□□□□□ -2.06
LIG1P18858 SNORD41-201ENST00000386967 70 ntBASIC2.19□□□□□ -2.06
LIG1P18858 RNU6-1321P-201ENST00000390905 107 ntBASIC2.19□□□□□ -2.06
LIG1P18858 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.19□□□□□ -2.06
LIG1P18858 AC009474.2-201ENST00000451383 136 ntBASIC2.19□□□□□ -2.06
LIG1P18858 MIR3122-201ENST00000577243 73 ntBASIC2.19□□□□□ -2.06
LIG1P18858 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LIG1P18858 RNU6-865P-201ENST00000364772 107 ntBASIC2.18□□□□□ -2.06
LIG1P18858 RNY1P13-201ENST00000365030 105 ntBASIC2.18□□□□□ -2.06
LIG1P18858 RPS29P28-201ENST00000446439 141 ntBASIC2.18□□□□□ -2.06
LIG1P18858 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
LIG1P18858 RNU6-86P-201ENST00000606534 107 ntBASIC2.18□□□□□ -2.06
LIG1P18858 MIR7843-201ENST00000622274 79 ntBASIC2.18□□□□□ -2.06
LIG1P18858 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.18□□□□□ -2.06
LIG1P18858 Y_RNA.98-201ENST00000363109 102 ntBASIC2.17□□□□□ -2.06
LIG1P18858 SNORD111.1-201ENST00000516421 86 ntBASIC2.17□□□□□ -2.06
LIG1P18858 AL357312.1-201ENST00000603879 298 ntBASIC2.17□□□□□ -2.06
LIG1P18858 SNORD78.1-201ENST00000390866 65 ntBASIC2.16□□□□□ -2.06
LIG1P18858 MIR548G-201ENST00000408442 89 ntBASIC2.16□□□□□ -2.06
LIG1P18858 RNU7-48P-201ENST00000458875 63 ntBASIC2.16□□□□□ -2.06
LIG1P18858 AC022137.1-201ENST00000483735 151 ntBASIC2.16□□□□□ -2.06
LIG1P18858 SNORA77B-201ENST00000578179 125 ntBASIC2.16□□□□□ -2.06
LIG1P18858 MIR4285-201ENST00000581001 85 ntBASIC2.16□□□□□ -2.06
LIG1P18858 RNU6-90P-201ENST00000606352 106 ntBASIC2.16□□□□□ -2.06
LIG1P18858 AC103810.7-201ENST00000607821 91 ntBASIC2.16□□□□□ -2.06
LIG1P18858 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.16□□□□□ -2.06
LIG1P18858 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LIG1P18858 RNA5SP432-201ENST00000362480 116 ntBASIC2.15□□□□□ -2.07
LIG1P18858 RNU6-439P-201ENST00000384188 106 ntBASIC2.15□□□□□ -2.07
LIG1P18858 RNU6-1237P-201ENST00000384777 107 ntBASIC2.15□□□□□ -2.07
LIG1P18858 MIR30A-201ENST00000385092 71 ntBASIC2.15□□□□□ -2.07
LIG1P18858 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LIG1P18858 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC244023.1-201ENST00000426884 112 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
LIG1P18858 RNU6-250P-201ENST00000516958 103 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC141846.1-201ENST00000568348 142 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC242498.1-201ENST00000604134 111 ntBASIC2.15□□□□□ -2.07
LIG1P18858 PRELID3BP2-201ENST00000605362 201 ntBASIC2.15□□□□□ -2.07
LIG1P18858 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.15□□□□□ -2.07
LIG1P18858 AC105081.1-201ENST00000617727 106 ntBASIC2.15□□□□□ -2.07
LIG1P18858 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIG1P18858 RNU6-219P-201ENST00000364728 107 ntBASIC2.14□□□□□ -2.07
LIG1P18858 SNORD38.2-201ENST00000384470 69 ntBASIC2.14□□□□□ -2.07
LIG1P18858 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
LIG1P18858 RNU6-402P-201ENST00000410678 103 ntBASIC2.14□□□□□ -2.07
LIG1P18858 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.14□□□□□ -2.07
LIG1P18858 RNU6-638P-201ENST00000516582 104 ntBASIC2.14□□□□□ -2.07
LIG1P18858 MIR3192-201ENST00000584920 77 ntBASIC2.14□□□□□ -2.07
LIG1P18858 AL662814.1-201ENST00000617364 121 ntBASIC2.14□□□□□ -2.07
LIG1P18858 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
LIG1P18858 Y_RNA.173-201ENST00000363776 113 ntBASIC2.13□□□□□ -2.07
LIG1P18858 Y_RNA.567-201ENST00000384736 106 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms