Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNA5SP445-201ENST00000515889 115 ntBASIC2.35□□□□□ -2.03
NID1P14543 RNU6-807P-201ENST00000516805 107 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
NID1P14543 MIR7843-201ENST00000622274 79 ntBASIC2.35□□□□□ -2.03
NID1P14543 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.34□□□□□ -2.03
NID1P14543 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
NID1P14543 RNA5SP48-201ENST00000363969 126 ntBASIC2.34□□□□□ -2.03
NID1P14543 RNA5SP292-201ENST00000390974 118 ntBASIC2.34□□□□□ -2.03
NID1P14543 RNA5SP148-201ENST00000516527 94 ntBASIC2.34□□□□□ -2.03
NID1P14543 DEFB122-202ENST00000569013 197 ntBASIC2.34□□□□□ -2.03
NID1P14543 AL357312.1-201ENST00000603879 298 ntBASIC2.34□□□□□ -2.03
NID1P14543 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
NID1P14543 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NID1P14543 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
NID1P14543 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
NID1P14543 Y_RNA.119-201ENST00000363301 96 ntBASIC2.33□□□□□ -2.04
NID1P14543 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
NID1P14543 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
NID1P14543 MIR588-201ENST00000384900 83 ntBASIC2.33□□□□□ -2.04
NID1P14543 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NID1P14543 RNU6-360P-201ENST00000390944 104 ntBASIC2.33□□□□□ -2.04
NID1P14543 AC244023.1-201ENST00000426884 112 ntBASIC2.33□□□□□ -2.04
NID1P14543 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
NID1P14543 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
NID1P14543 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
NID1P14543 RNU6-1015P-201ENST00000517121 99 ntBASIC2.33□□□□□ -2.04
NID1P14543 SNORA4-201ENST00000584302 138 ntBASIC2.33□□□□□ -2.04
NID1P14543 AC242498.1-201ENST00000604134 111 ntBASIC2.33□□□□□ -2.04
NID1P14543 AL096861.1-201ENST00000610899 123 ntBASIC2.33□□□□□ -2.04
NID1P14543 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.33□□□□□ -2.04
NID1P14543 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NID1P14543 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
NID1P14543 RNA5SP68-201ENST00000363885 119 ntBASIC2.32□□□□□ -2.04
NID1P14543 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
NID1P14543 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
NID1P14543 MIR653-201ENST00000385279 96 ntBASIC2.32□□□□□ -2.04
NID1P14543 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NID1P14543 RNA5SP100-201ENST00000410903 110 ntBASIC2.32□□□□□ -2.04
NID1P14543 RNA5SP59-201ENST00000410922 110 ntBASIC2.32□□□□□ -2.04
NID1P14543 HSPE1P24-201ENST00000450782 238 ntBASIC2.32□□□□□ -2.04
NID1P14543 SNORD111.1-201ENST00000516421 86 ntBASIC2.32□□□□□ -2.04
NID1P14543 Y_RNA.681-201ENST00000516445 113 ntBASIC2.32□□□□□ -2.04
NID1P14543 SNORA18.5-201ENST00000516616 101 ntBASIC2.32□□□□□ -2.04
NID1P14543 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.32□□□□□ -2.04
NID1P14543 RNU6-448P-201ENST00000517052 107 ntBASIC2.32□□□□□ -2.04
NID1P14543 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.32□□□□□ -2.04
NID1P14543 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.32□□□□□ -2.04
NID1P14543 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.32□□□□□ -2.04
NID1P14543 MIR1297-201ENST00000637311 77 ntBASIC2.32□□□□□ -2.04
NID1P14543 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NID1P14543 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
NID1P14543 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
NID1P14543 Y_RNA.340-201ENST00000365330 92 ntBASIC2.31□□□□□ -2.04
NID1P14543 SNORD77.2-201ENST00000391045 68 ntBASIC2.31□□□□□ -2.04
NID1P14543 RNU6-243P-201ENST00000391140 107 ntBASIC2.31□□□□□ -2.04
NID1P14543 RNU6-1254P-201ENST00000391266 104 ntBASIC2.31□□□□□ -2.04
NID1P14543 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
NID1P14543 AC005908.1-201ENST00000468701 347 ntBASIC2.31□□□□□ -2.04
NID1P14543 RNU6-70P-201ENST00000516438 60 ntBASIC2.31□□□□□ -2.04
NID1P14543 SNORA31.17-201ENST00000516953 127 ntBASIC2.31□□□□□ -2.04
NID1P14543 SNORD53-201ENST00000579969 78 ntBASIC2.31□□□□□ -2.04
NID1P14543 MIR4484-201ENST00000582855 83 ntBASIC2.31□□□□□ -2.04
NID1P14543 MIR4769-201ENST00000584126 77 ntBASIC2.31□□□□□ -2.04
NID1P14543 AC010297.1-201ENST00000623948 149 ntBASIC2.31□□□□□ -2.04
NID1P14543 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NID1P14543 Y_RNA.264-201ENST00000364665 102 ntBASIC2.3□□□□□ -2.04
NID1P14543 MIR635-201ENST00000384830 98 ntBASIC2.3□□□□□ -2.04
NID1P14543 MIR563-201ENST00000385080 79 ntBASIC2.3□□□□□ -2.04
NID1P14543 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
NID1P14543 MIR548U-201ENST00000390728 81 ntBASIC2.3□□□□□ -2.04
NID1P14543 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
NID1P14543 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.3□□□□□ -2.04
NID1P14543 AC104996.3-201ENST00000590718 94 ntBASIC2.3□□□□□ -2.04
NID1P14543 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
NID1P14543 PRELID3BP2-201ENST00000605362 201 ntBASIC2.3□□□□□ -2.04
NID1P14543 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.3□□□□□ -2.04
NID1P14543 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NID1P14543 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
NID1P14543 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
NID1P14543 AC008163.1-202ENST00000636004 2889 ntBASIC2.29□□□□□ -2.04
NID1P14543 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NID1P14543 SNORD36A-201ENST00000362874 73 ntBASIC2.29□□□□□ -2.04
NID1P14543 Y_RNA.283-201ENST00000364798 112 ntBASIC2.29□□□□□ -2.04
NID1P14543 RNU6-203P-201ENST00000384038 104 ntBASIC2.29□□□□□ -2.04
NID1P14543 Y_RNA.532-201ENST00000384590 113 ntBASIC2.29□□□□□ -2.04
NID1P14543 RNA5SP270-201ENST00000411361 118 ntBASIC2.29□□□□□ -2.04
NID1P14543 snoU13.26-201ENST00000459452 105 ntBASIC2.29□□□□□ -2.04
NID1P14543 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
NID1P14543 MIR3064-201ENST00000581130 66 ntBASIC2.29□□□□□ -2.04
NID1P14543 MIR4524B-201ENST00000581569 115 ntBASIC2.29□□□□□ -2.04
NID1P14543 MIR4658-201ENST00000584344 65 ntBASIC2.29□□□□□ -2.04
NID1P14543 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
NID1P14543 AL161722.3-201ENST00000605789 2983 ntBASIC2.29□□□□□ -2.04
NID1P14543 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NID1P14543 Y_RNA.491-201ENST00000384417 107 ntBASIC2.28□□□□□ -2.04
NID1P14543 MIR516A2-201ENST00000384888 90 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 457.3 ms