Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.38□□□□□ -2.03
RARAP10276 AC079804.2-201ENST00000490376 200 ntBASIC2.38□□□□□ -2.03
RARAP10276 SNORD111.1-201ENST00000516421 86 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNU2-19P-201ENST00000517288 84 ntBASIC2.38□□□□□ -2.03
RARAP10276 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.38□□□□□ -2.03
RARAP10276 AC012676.2-201ENST00000619258 186 ntBASIC2.38□□□□□ -2.03
RARAP10276 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
RARAP10276 MIR764-201ENST00000390811 85 ntBASIC2.37□□□□□ -2.03
RARAP10276 snoU13.18-201ENST00000459483 104 ntBASIC2.37□□□□□ -2.03
RARAP10276 RNU6-857P-201ENST00000515893 110 ntBASIC2.37□□□□□ -2.03
RARAP10276 AC020891.4-201ENST00000605745 93 ntBASIC2.37□□□□□ -2.03
RARAP10276 AL662814.1-201ENST00000617364 121 ntBASIC2.37□□□□□ -2.03
RARAP10276 AL353997.5-201ENST00000618886 171 ntBASIC2.37□□□□□ -2.03
RARAP10276 RNA5SP48-201ENST00000363969 126 ntBASIC2.36□□□□□ -2.03
RARAP10276 RNA5SP259-201ENST00000365541 109 ntBASIC2.36□□□□□ -2.03
RARAP10276 MIR513A1-201ENST00000385138 129 ntBASIC2.36□□□□□ -2.03
RARAP10276 SNORD41-201ENST00000386967 70 ntBASIC2.36□□□□□ -2.03
RARAP10276 RNU6-613P-201ENST00000410412 108 ntBASIC2.36□□□□□ -2.03
RARAP10276 MTND5P40-201ENST00000559945 246 ntBASIC2.36□□□□□ -2.03
RARAP10276 AL513043.2-201ENST00000573941 143 ntBASIC2.36□□□□□ -2.03
RARAP10276 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
RARAP10276 RNA5SP325-201ENST00000363756 130 ntBASIC2.35□□□□□ -2.03
RARAP10276 Y_RNA.607-201ENST00000410597 98 ntBASIC2.35□□□□□ -2.03
RARAP10276 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
RARAP10276 MIR4781-201ENST00000585250 76 ntBASIC2.35□□□□□ -2.03
RARAP10276 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RARAP10276 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RARAP10276 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
RARAP10276 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RARAP10276 SNORA2B-201ENST00000384583 137 ntBASIC2.34□□□□□ -2.03
RARAP10276 MIR181B2-201ENST00000385004 89 ntBASIC2.34□□□□□ -2.03
RARAP10276 MIR518E-201ENST00000385252 88 ntBASIC2.34□□□□□ -2.03
RARAP10276 AC244023.1-201ENST00000426884 112 ntBASIC2.34□□□□□ -2.03
RARAP10276 AL161932.1-201ENST00000437408 146 ntBASIC2.34□□□□□ -2.03
RARAP10276 JTBP1-201ENST00000441314 247 ntBASIC2.34□□□□□ -2.03
RARAP10276 AC055731.1-201ENST00000474387 401 ntBASIC2.34□□□□□ -2.03
RARAP10276 AC133485.1-201ENST00000567176 124 ntBASIC2.34□□□□□ -2.03
RARAP10276 AC242498.1-201ENST00000604134 111 ntBASIC2.34□□□□□ -2.03
RARAP10276 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
RARAP10276 HSBP1P2-201ENST00000299671 229 ntBASIC2.33□□□□□ -2.04
RARAP10276 Y_RNA.221-201ENST00000364248 96 ntBASIC2.33□□□□□ -2.04
RARAP10276 SNORD115-27-201ENST00000364430 82 ntBASIC2.33□□□□□ -2.04
RARAP10276 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
RARAP10276 RNU6-949P-201ENST00000384040 107 ntBASIC2.33□□□□□ -2.04
RARAP10276 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.33□□□□□ -2.04
RARAP10276 AC027119.1-201ENST00000440877 241 ntBASIC2.33□□□□□ -2.04
RARAP10276 RNU6-1053P-201ENST00000515930 101 ntBASIC2.33□□□□□ -2.04
RARAP10276 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
RARAP10276 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RARAP10276 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RARAP10276 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
RARAP10276 RNU6-439P-201ENST00000384188 106 ntBASIC2.32□□□□□ -2.04
RARAP10276 RNU6-480P-201ENST00000384332 107 ntBASIC2.32□□□□□ -2.04
RARAP10276 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
RARAP10276 snoU13.2-201ENST00000459201 104 ntBASIC2.32□□□□□ -2.04
RARAP10276 RNU6-922P-201ENST00000516753 99 ntBASIC2.32□□□□□ -2.04
RARAP10276 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.32□□□□□ -2.04
RARAP10276 MIR3192-201ENST00000584920 77 ntBASIC2.32□□□□□ -2.04
RARAP10276 AP000942.3-201ENST00000603702 160 ntBASIC2.32□□□□□ -2.04
RARAP10276 PRELID3BP2-201ENST00000605362 201 ntBASIC2.32□□□□□ -2.04
RARAP10276 RNA5SP276-201ENST00000362580 94 ntBASIC2.31□□□□□ -2.04
RARAP10276 RNY1P2-201ENST00000364820 117 ntBASIC2.31□□□□□ -2.04
RARAP10276 RNU6-652P-201ENST00000365488 107 ntBASIC2.31□□□□□ -2.04
RARAP10276 MIR1302-7-201ENST00000408841 72 ntBASIC2.31□□□□□ -2.04
RARAP10276 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
RARAP10276 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.31□□□□□ -2.04
RARAP10276 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RARAP10276 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RARAP10276 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RARAP10276 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RARAP10276 RNU6-24P-201ENST00000384440 107 ntBASIC2.3□□□□□ -2.04
RARAP10276 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
RARAP10276 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
RARAP10276 AL096861.1-201ENST00000610899 123 ntBASIC2.3□□□□□ -2.04
RARAP10276 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
RARAP10276 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RARAP10276 WWP1P1-201ENST00000466609 2769 ntBASIC2.3□□□□□ -2.04
RARAP10276 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RARAP10276 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RARAP10276 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
RARAP10276 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RARAP10276 Y_RNA.178-201ENST00000363832 102 ntBASIC2.29□□□□□ -2.04
RARAP10276 Y_RNA.374-201ENST00000365606 101 ntBASIC2.29□□□□□ -2.04
RARAP10276 MIR588-201ENST00000384900 83 ntBASIC2.29□□□□□ -2.04
RARAP10276 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
RARAP10276 SNORD23.1-201ENST00000408212 104 ntBASIC2.29□□□□□ -2.04
RARAP10276 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
RARAP10276 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.29□□□□□ -2.04
RARAP10276 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.29□□□□□ -2.04
RARAP10276 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RARAP10276 RNA5SP133-201ENST00000363368 119 ntBASIC2.28□□□□□ -2.04
RARAP10276 Y_RNA.316-201ENST00000365118 111 ntBASIC2.28□□□□□ -2.04
RARAP10276 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
RARAP10276 MIR563-201ENST00000385080 79 ntBASIC2.28□□□□□ -2.04
RARAP10276 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.28□□□□□ -2.04
RARAP10276 RNU6-717P-201ENST00000459076 104 ntBASIC2.28□□□□□ -2.04
RARAP10276 AC090897.1-201ENST00000580909 226 ntBASIC2.28□□□□□ -2.04
RARAP10276 AL357312.1-201ENST00000603879 298 ntBASIC2.28□□□□□ -2.04
RARAP10276 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms