Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL589743.1-201ENST00000551932 2712 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.188-201ENST00000363952 111 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.233-201ENST00000364407 101 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 RNU6-768P-201ENST00000384683 107 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.401-201ENST00000383965 117 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 RNU4-83P-201ENST00000410863 133 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 RNU6-1219P-201ENST00000516143 112 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 AC141846.1-201ENST00000568348 142 ntBASIC0.54□□□□□ -2.32
RAB40ALP0C0E4 Y_RNA.337-201ENST00000365312 102 ntBASIC0.53□□□□□ -2.32
RAB40ALP0C0E4 AC022559.1-201ENST00000520905 205 ntBASIC0.53□□□□□ -2.32
RAB40ALP0C0E4 MIR6779-201ENST00000617283 64 ntBASIC0.53□□□□□ -2.32
RAB40ALP0C0E4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 RNU6-818P-201ENST00000364837 108 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.297-201ENST00000364950 91 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 SNORA18-201ENST00000384416 132 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 AC141273.2-201ENST00000618989 130 ntBASIC0.52□□□□□ -2.33
RAB40ALP0C0E4 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 RNU6-448P-201ENST00000517052 107 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 AC072026.1-201ENST00000605023 201 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 AC010487.4-201ENST00000637027 61 ntBASIC0.51□□□□□ -2.33
RAB40ALP0C0E4 RNU6-403P-201ENST00000363163 104 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 RNU6-379P-201ENST00000363813 104 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 RNA5SP117-201ENST00000365294 118 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 SNORA75.5-201ENST00000391291 81 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 RNU5E-9P-201ENST00000411164 104 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.793-201ENST00000411222 111 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 AL022718.1-201ENST00000412004 84 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 AC078938.1-201ENST00000620993 318 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 MIR6844-201ENST00000637122 62 ntBASIC0.5□□□□□ -2.33
RAB40ALP0C0E4 RNU6-349P-201ENST00000362402 107 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 RNU6-949P-201ENST00000384040 107 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 RNA5SP144-201ENST00000410846 116 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 RNA5SP236-201ENST00000516169 116 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 AP002392.1-201ENST00000537692 208 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 MIR8066-201ENST00000617280 78 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
RAB40ALP0C0E4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.48□□□□□ -2.33
RAB40ALP0C0E4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-690P-201ENST00000365242 106 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 SNORA72.6-201ENST00000384520 129 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-239P-201ENST00000390990 99 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 MTATP6P21-201ENST00000440681 189 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU7-113P-201ENST00000459273 62 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-388P-201ENST00000517012 105 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNU6-389P-201ENST00000517048 105 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 MIR3646-201ENST00000578301 84 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 AC092634.7-201ENST00000621022 103 ntBASIC0.47□□□□□ -2.33
RAB40ALP0C0E4 RNY1P13-201ENST00000365030 105 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 MT-TG-201ENST00000387429 68 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 SNORD37.2-201ENST00000391075 66 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
RAB40ALP0C0E4 RNU4-84P-201ENST00000364200 139 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 RNU6-588P-201ENST00000410281 105 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 RNA5SP33-201ENST00000516687 98 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms