Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
CLDN1O95832 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CLDN1O95832 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CLDN1O95832 RNU6-508P-201ENST00000363231 103 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 RNU6-309P-201ENST00000364573 106 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 RNU4-16P-201ENST00000364737 141 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 SNORD18B-201ENST00000365659 72 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 Y_RNA.568-201ENST00000384742 113 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
CLDN1O95832 Y_RNA.757-201ENST00000578934 114 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 AC012676.2-201ENST00000619258 186 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
CLDN1O95832 SNORD115-2-201ENST00000362842 82 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 SNORD115-20-201ENST00000365099 82 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU6-690P-201ENST00000365242 106 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 SNORD12C-201ENST00000386307 89 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU6-205P-201ENST00000390858 107 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU7-62P-201ENST00000458856 62 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU6-426P-201ENST00000516464 97 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNA5SP476-201ENST00000516613 103 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 Y_RNA.703-201ENST00000516846 111 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 RNU6-1258P-201ENST00000516911 111 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 AC023827.1-201ENST00000569247 97 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 MIR3121-201ENST00000579680 77 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 uc_338.6-201ENST00000613544 171 ntBASIC0.84□□□□□ -2.27
CLDN1O95832 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CLDN1O95832 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 RNA5SP257-201ENST00000363023 116 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 SNORD114-23-201ENST00000363536 72 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 SNORD50.2-201ENST00000365465 70 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 RNU6-746P-201ENST00000384112 109 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 SNORA2B-201ENST00000384583 137 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 RNA5SP121-201ENST00000516537 101 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 AP001328.1-201ENST00000528550 176 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 U7.2-201ENST00000607576 63 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 AC010487.4-201ENST00000637027 61 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
CLDN1O95832 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CLDN1O95832 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLDN1O95832 MIR30D-201ENST00000362283 70 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 RNU6-1165P-201ENST00000410119 107 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 RNU6-240P-201ENST00000516098 97 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 RNU6-346P-201ENST00000516288 111 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 RNA5SP395-201ENST00000516567 118 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 Y_RNA.692-201ENST00000516627 105 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 AC133485.4-201ENST00000561835 220 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 AC138907.4-201ENST00000570107 226 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
CLDN1O95832 MIR4305-201ENST00000583252 102 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 AC108081.1-201ENST00000604358 221 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 RNU6-94P-201ENST00000607728 107 ntBASIC0.82□□□□□ -2.28
CLDN1O95832 Y_RNA.85-201ENST00000363014 111 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 Y_RNA.343-201ENST00000365354 112 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 MT-TF-201ENST00000387314 71 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 MIR1827-201ENST00000408549 66 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 MIR18B-201ENST00000454574 71 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 RNU2-35P-201ENST00000516446 142 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 AL662814.1-201ENST00000617364 121 ntBASIC0.81□□□□□ -2.28
CLDN1O95832 RNA5SP62-201ENST00000363457 110 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 Y_RNA.171-201ENST00000363760 102 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 Y_RNA.366-201ENST00000365540 102 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 RNU6-257P-201ENST00000410238 98 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 MTND4LP9-201ENST00000427694 174 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 FABP5P4-201ENST00000437203 171 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 snoU13.21-201ENST00000459368 105 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 MIR3133-201ENST00000583157 78 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 AC021443.1-201ENST00000604478 211 ntBASIC0.8□□□□□ -2.28
CLDN1O95832 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.8□□□□□ -2.28
CLDN1O95832 Y_RNA.114-201ENST00000363265 113 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 Y_RNA.298-201ENST00000364960 107 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 Y_RNA.617-201ENST00000410920 90 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 RNU7-123P-201ENST00000515911 60 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 RNA5SP272-201ENST00000516095 111 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 RNU6-1110P-201ENST00000516462 101 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 MIR8087-201ENST00000612745 78 ntBASIC0.79□□□□□ -2.28
CLDN1O95832 RNU6-647P-201ENST00000364243 107 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 Y_RNA.470-201ENST00000384307 117 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 Y_RNA.531-201ENST00000384589 121 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 SNORA40-201ENST00000388090 126 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 RNU6-1086P-201ENST00000410930 100 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 RNU7-113P-201ENST00000459273 62 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 RNU7-35P-201ENST00000517174 62 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 IGKV1-22-201ENST00000524313 326 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms