Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
DDX58O95786 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
DDX58O95786 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DDX58O95786 AC107027.2-201ENST00000512197 115 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.62□□□□□ -2.31
DDX58O95786 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AC009779.6-201ENST00000603972 165 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AL662814.1-201ENST00000617364 121 ntBASIC0.62□□□□□ -2.31
DDX58O95786 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
DDX58O95786 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
DDX58O95786 Y_RNA.188-201ENST00000363952 111 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU4-45P-201ENST00000365469 141 ntBASIC0.61□□□□□ -2.31
DDX58O95786 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU4-83P-201ENST00000410863 133 ntBASIC0.61□□□□□ -2.31
DDX58O95786 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-1271P-201ENST00000517049 105 ntBASIC0.61□□□□□ -2.31
DDX58O95786 AC130289.1-201ENST00000577321 73 ntBASIC0.61□□□□□ -2.31
DDX58O95786 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
DDX58O95786 RNU6-312P-201ENST00000364629 107 ntBASIC0.6□□□□□ -2.31
DDX58O95786 Y_RNA.337-201ENST00000365312 102 ntBASIC0.6□□□□□ -2.31
DDX58O95786 Y_RNA.435-201ENST00000384095 112 ntBASIC0.6□□□□□ -2.31
DDX58O95786 RNU6-768P-201ENST00000384683 107 ntBASIC0.6□□□□□ -2.31
DDX58O95786 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.6□□□□□ -2.31
DDX58O95786 AC022559.1-201ENST00000520905 205 ntBASIC0.6□□□□□ -2.31
DDX58O95786 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
DDX58O95786 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
DDX58O95786 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.6□□□□□ -2.31
DDX58O95786 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.233-201ENST00000364407 101 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.357-201ENST00000365487 109 ntBASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.401-201ENST00000383965 117 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNY1P6-201ENST00000384193 109 ntBASIC0.59□□□□□ -2.31
DDX58O95786 SNORA18-201ENST00000384416 132 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNU6-1219P-201ENST00000516143 112 ntBASIC0.59□□□□□ -2.31
DDX58O95786 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
DDX58O95786 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNU6-818P-201ENST00000364837 108 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.297-201ENST00000364950 91 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.793-201ENST00000411222 111 ntBASIC0.58□□□□□ -2.32
DDX58O95786 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
DDX58O95786 AC141846.1-201ENST00000568348 142 ntBASIC0.58□□□□□ -2.32
DDX58O95786 MIR6844-201ENST00000637122 62 ntBASIC0.58□□□□□ -2.32
DDX58O95786 MIR6841-201ENST00000637129 72 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
DDX58O95786 RNU6-1082P-201ENST00000364574 107 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.274-201ENST00000364714 101 ntBASIC0.57□□□□□ -2.32
DDX58O95786 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.644-201ENST00000459006 113 ntBASIC0.57□□□□□ -2.32
DDX58O95786 AC002350.1-201ENST00000490759 375 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.674-201ENST00000516362 113 ntBASIC0.57□□□□□ -2.32
DDX58O95786 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
DDX58O95786 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.30-201ENST00000362572 97 ntBASIC0.56□□□□□ -2.32
DDX58O95786 SNORA72.6-201ENST00000384520 129 ntBASIC0.56□□□□□ -2.32
DDX58O95786 U8.15-201ENST00000390947 134 ntBASIC0.56□□□□□ -2.32
DDX58O95786 RNU5E-9P-201ENST00000411164 104 ntBASIC0.56□□□□□ -2.32
DDX58O95786 Y_RNA.115-201ENST00000363272 98 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.171-201ENST00000363760 102 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.374-201ENST00000365606 101 ntBASIC0.55□□□□□ -2.32
DDX58O95786 SNORD37.2-201ENST00000391075 66 ntBASIC0.55□□□□□ -2.32
DDX58O95786 SNORD100-201ENST00000408573 76 ntBASIC0.55□□□□□ -2.32
DDX58O95786 AL022718.1-201ENST00000412004 84 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNU7-113P-201ENST00000459273 62 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.757-201ENST00000578934 114 ntBASIC0.55□□□□□ -2.32
DDX58O95786 AC141273.2-201ENST00000618989 130 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNU6-690P-201ENST00000365242 106 ntBASIC0.54□□□□□ -2.32
DDX58O95786 Y_RNA.552-201ENST00000384665 112 ntBASIC0.54□□□□□ -2.32
DDX58O95786 SNORA75.5-201ENST00000391291 81 ntBASIC0.54□□□□□ -2.32
DDX58O95786 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AP002392.1-201ENST00000537692 208 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC072026.1-201ENST00000605023 201 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC078938.1-201ENST00000620993 318 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
DDX58O95786 Y_RNA.13-201ENST00000362403 112 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-379P-201ENST00000363813 104 ntBASIC0.53□□□□□ -2.32
DDX58O95786 Y_RNA.258-201ENST00000364613 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 Y_RNA.476-201ENST00000384347 108 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-588P-201ENST00000410281 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-1086P-201ENST00000410930 100 ntBASIC0.53□□□□□ -2.32
DDX58O95786 MTATP6P21-201ENST00000440681 189 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-388P-201ENST00000517012 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-389P-201ENST00000517048 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 MIR8087-201ENST00000612745 78 ntBASIC0.53□□□□□ -2.32
DDX58O95786 SNORD18B-201ENST00000365659 72 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNU6-949P-201ENST00000384040 107 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNA5SP144-201ENST00000410846 116 ntBASIC0.52□□□□□ -2.33
DDX58O95786 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNA5SP33-201ENST00000516687 98 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNU6-1258P-201ENST00000516911 111 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 273.7 ms