Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SNORA63.5-201ENST00000363548 123 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 SNORA2A-201ENST00000383885 135 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 MIR593-201ENST00000384856 100 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RNU4-43P-201ENST00000410628 137 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 TRBVB-201ENST00000477100 408 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RPL39P34-201ENST00000477141 156 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RNU7-79P-201ENST00000516082 62 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RNU6-531P-201ENST00000516694 104 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 SCARNA15-202ENST00000516881 127 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 DEFB131E-201ENST00000532329 154 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 AC020661.2-201ENST00000560114 134 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 RNU1-29P-201ENST00000606574 126 ntBASIC-0.11□□□□□ -2.43
CPSF4O95639 SNORD114-26-201ENST00000363543 72 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 RNU4-17P-201ENST00000365598 141 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 MIR548H2-201ENST00000408874 88 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 RNU6-893P-201ENST00000458841 100 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 MIR4282-201ENST00000583613 67 ntBASIC-0.12□□□□□ -2.43
CPSF4O95639 RNA5SP133-201ENST00000363368 119 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 RNU6-978P-201ENST00000364371 103 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
CPSF4O95639 MIR1197-201ENST00000408818 88 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 RNU6-985P-201ENST00000410182 104 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 SNORD116-25-201ENST00000516517 92 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 AP003072.1-201ENST00000531740 145 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
CPSF4O95639 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNU4-58P-201ENST00000363192 141 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNU6-103P-201ENST00000363686 107 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 AL121914.1-201ENST00000450188 156 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNA5SP480-201ENST00000516840 109 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNU6-782P-201ENST00000516852 104 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNA5SP330-201ENST00000517096 96 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 RNU7-35P-201ENST00000517174 62 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 MIR378D2-201ENST00000580636 98 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 U6.109-201ENST00000636749 87 ntBASIC-0.14□□□□□ -2.43
CPSF4O95639 MIR335-201ENST00000362173 94 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 SNORD115-24-201ENST00000363528 82 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 RNU6-726P-201ENST00000364680 107 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 MIR624-201ENST00000385217 97 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 RNA5SP144-201ENST00000410846 116 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 AC138869.1-201ENST00000568623 124 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
CPSF4O95639 MIR101-2-201ENST00000362195 79 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 RNU6-702P-201ENST00000364982 107 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 RNU6-929P-201ENST00000384429 107 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 RNU4-70P-201ENST00000384579 139 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.16□□□□□ -2.44
CPSF4O95639 MIR4643-201ENST00000577473 78 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 MIR4744-201ENST00000581563 82 ntBASIC-0.16□□□□□ -2.44
CPSF4O95639 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 RNA5SP457-201ENST00000363657 124 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 SNORA32-201ENST00000384072 121 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 RNY1P6-201ENST00000384193 109 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 RNU6-713P-201ENST00000384761 107 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 MT-TW-201ENST00000387382 68 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 MIR501-201ENST00000390204 84 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 MIR892B-201ENST00000401279 77 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 MTND4LP11-201ENST00000422184 280 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 AC244505.6-201ENST00000452829 130 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 RNU7-113P-201ENST00000459273 62 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4O95639 AC138749.4-201ENST00000563970 127 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 AC011921.3-201ENST00000605540 361 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 SNORA70.25-201ENST00000612741 95 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.17□□□□□ -2.44
CPSF4O95639 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.17□□□□□ -2.44
CPSF4O95639 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 SNORA33.2-201ENST00000365413 134 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 RNU6-652P-201ENST00000365488 107 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 RNU6-578P-201ENST00000390980 103 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 MIR548L-201ENST00000408303 86 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 AL117351.2-201ENST00000513571 157 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 RNY3P16-201ENST00000516338 101 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 RNA5SP33-201ENST00000516687 98 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms