Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU4-61P-201ENST00000411243 107 ntBASIC1.19□□□□□ -2.22
SNX2O60749 Y_RNA.630-201ENST00000411370 108 ntBASIC1.19□□□□□ -2.22
SNX2O60749 RNA5SP33-201ENST00000516687 98 ntBASIC1.19□□□□□ -2.22
SNX2O60749 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
SNX2O60749 RNU6-80P-201ENST00000384195 107 ntBASIC1.18□□□□□ -2.22
SNX2O60749 SNORD111-201ENST00000408139 94 ntBASIC1.18□□□□□ -2.22
SNX2O60749 AC015818.7-201ENST00000428754 109 ntBASIC1.18□□□□□ -2.22
SNX2O60749 AC087499.7-201ENST00000441958 109 ntBASIC1.18□□□□□ -2.22
SNX2O60749 RNU6-772P-201ENST00000516042 105 ntBASIC1.18□□□□□ -2.22
SNX2O60749 MIR548AE2-201ENST00000583456 67 ntBASIC1.18□□□□□ -2.22
SNX2O60749 MIR30D-201ENST00000362283 70 ntBASIC1.17□□□□□ -2.22
SNX2O60749 SNORD58C-201ENST00000365223 64 ntBASIC1.17□□□□□ -2.22
SNX2O60749 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
SNX2O60749 MIR1270-201ENST00000459320 83 ntBASIC1.17□□□□□ -2.22
SNX2O60749 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
SNX2O60749 AC132825.6-201ENST00000638861 357 ntBASIC1.17□□□□□ -2.22
SNX2O60749 MIRLET7F2-201ENST00000385277 83 ntBASIC1.16□□□□□ -2.22
SNX2O60749 AC141846.1-201ENST00000568348 142 ntBASIC1.16□□□□□ -2.22
SNX2O60749 AL662814.1-201ENST00000617364 121 ntBASIC1.16□□□□□ -2.22
SNX2O60749 Y_RNA.528-201ENST00000384575 108 ntBASIC1.15□□□□□ -2.23
SNX2O60749 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
SNX2O60749 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.15□□□□□ -2.23
SNX2O60749 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
SNX2O60749 RNU6-659P-201ENST00000516454 104 ntBASIC1.15□□□□□ -2.23
SNX2O60749 AC025166.1-201ENST00000612411 163 ntBASIC1.15□□□□□ -2.23
SNX2O60749 AL365222.1-201ENST00000614661 98 ntBASIC1.15□□□□□ -2.23
SNX2O60749 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
SNX2O60749 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SNX2O60749 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SNX2O60749 Y_RNA.261-201ENST00000364631 102 ntBASIC1.14□□□□□ -2.23
SNX2O60749 RNU6-934P-201ENST00000365154 107 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORD116-14-201ENST00000383894 92 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORD116-17-201ENST00000383929 92 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORD116-15-201ENST00000384445 92 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
SNX2O60749 SNORD116-19-201ENST00000384729 92 ntBASIC1.14□□□□□ -2.23
SNX2O60749 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
SNX2O60749 RNU6-735P-201ENST00000410612 107 ntBASIC1.14□□□□□ -2.23
SNX2O60749 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
SNX2O60749 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
SNX2O60749 RNU6-369P-201ENST00000362515 102 ntBASIC1.13□□□□□ -2.23
SNX2O60749 RNA5SP136-201ENST00000410906 107 ntBASIC1.13□□□□□ -2.23
SNX2O60749 RNU7-79P-201ENST00000516082 62 ntBASIC1.13□□□□□ -2.23
SNX2O60749 RNU6-1333P-201ENST00000516162 93 ntBASIC1.13□□□□□ -2.23
SNX2O60749 RNU7-35P-201ENST00000517174 62 ntBASIC1.13□□□□□ -2.23
SNX2O60749 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.13□□□□□ -2.23
SNX2O60749 MTND5P18-201ENST00000445624 1801 ntBASIC1.12□□□□□ -2.23
SNX2O60749 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SNX2O60749 AL157777.2-201ENST00000258070 137 ntBASIC1.12□□□□□ -2.23
SNX2O60749 Y_RNA.127-201ENST00000363386 109 ntBASIC1.12□□□□□ -2.23
SNX2O60749 RNY1P13-201ENST00000365030 105 ntBASIC1.12□□□□□ -2.23
SNX2O60749 RNU6-994P-201ENST00000410507 111 ntBASIC1.12□□□□□ -2.23
SNX2O60749 RNU4-69P-201ENST00000410677 143 ntBASIC1.12□□□□□ -2.23
SNX2O60749 RNU6-1086P-201ENST00000410930 100 ntBASIC1.12□□□□□ -2.23
SNX2O60749 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
SNX2O60749 RNU6-406P-201ENST00000516470 107 ntBASIC1.12□□□□□ -2.23
SNX2O60749 Y_RNA.712-201ENST00000517011 92 ntBASIC1.12□□□□□ -2.23
SNX2O60749 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
SNX2O60749 AC020891.4-201ENST00000605745 93 ntBASIC1.12□□□□□ -2.23
SNX2O60749 AL589743.1-201ENST00000551932 2712 ntBASIC1.11□□□□□ -2.23
SNX2O60749 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
SNX2O60749 Y_RNA.198-201ENST00000364013 98 ntBASIC1.11□□□□□ -2.23
SNX2O60749 SNORA25.9-201ENST00000365087 128 ntBASIC1.11□□□□□ -2.23
SNX2O60749 RNA5SP247-201ENST00000411181 105 ntBASIC1.11□□□□□ -2.23
SNX2O60749 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
SNX2O60749 MIR18B-201ENST00000454574 71 ntBASIC1.11□□□□□ -2.23
SNX2O60749 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
SNX2O60749 COX6CP6-201ENST00000490840 228 ntBASIC1.11□□□□□ -2.23
SNX2O60749 PDCD5P2-201ENST00000507570 312 ntBASIC1.11□□□□□ -2.23
SNX2O60749 RNU6-789P-201ENST00000517105 102 ntBASIC1.11□□□□□ -2.23
SNX2O60749 MIR4771-2-201ENST00000577758 74 ntBASIC1.11□□□□□ -2.23
SNX2O60749 MIR4771-1-201ENST00000582617 74 ntBASIC1.11□□□□□ -2.23
SNX2O60749 MIR3914-2-201ENST00000637339 95 ntBASIC1.11□□□□□ -2.23
SNX2O60749 RNU1-36P-201ENST00000365130 165 ntBASIC1.1□□□□□ -2.23
SNX2O60749 U8.15-201ENST00000390947 134 ntBASIC1.1□□□□□ -2.23
SNX2O60749 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
SNX2O60749 RPS26P5-201ENST00000418544 335 ntBASIC1.1□□□□□ -2.23
SNX2O60749 AL606753.1-201ENST00000427435 87 ntBASIC1.1□□□□□ -2.23
SNX2O60749 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
SNX2O60749 RNU7-6P-201ENST00000516845 62 ntBASIC1.1□□□□□ -2.23
SNX2O60749 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
SNX2O60749 SNORA4-201ENST00000584302 138 ntBASIC1.1□□□□□ -2.23
SNX2O60749 AL359881.1-201ENST00000602916 267 ntBASIC1.1□□□□□ -2.23
SNX2O60749 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.1□□□□□ -2.23
SNX2O60749 SNORD113-1-201ENST00000365321 69 ntBASIC1.09□□□□□ -2.23
SNX2O60749 RNU6-22P-201ENST00000384355 107 ntBASIC1.09□□□□□ -2.23
SNX2O60749 MT-TF-201ENST00000387314 71 ntBASIC1.09□□□□□ -2.23
SNX2O60749 AC096949.1-201ENST00000412047 152 ntBASIC1.09□□□□□ -2.23
SNX2O60749 AC087741.2-201ENST00000619415 172 ntBASIC1.09□□□□□ -2.23
SNX2O60749 AC023934.1-201ENST00000574529 2389 ntBASIC1.09□□□□□ -2.23
SNX2O60749 Y_RNA.299-201ENST00000364973 94 ntBASIC1.08□□□□□ -2.24
SNX2O60749 RNU6-949P-201ENST00000384040 107 ntBASIC1.08□□□□□ -2.24
SNX2O60749 RNU6-1117P-201ENST00000384525 104 ntBASIC1.08□□□□□ -2.24
SNX2O60749 RNU7-185P-201ENST00000459215 60 ntBASIC1.08□□□□□ -2.24
SNX2O60749 SNORD67.1-201ENST00000516618 108 ntBASIC1.08□□□□□ -2.24
SNX2O60749 Y_RNA.213-201ENST00000364178 111 ntBASIC1.07□□□□□ -2.24
SNX2O60749 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
SNX2O60749 RNU6-616P-201ENST00000384353 107 ntBASIC1.07□□□□□ -2.24
SNX2O60749 SNORA19-201ENST00000384737 128 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms