Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 SNORD115-19-201ENST00000363098 82 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 SNORD115-18-201ENST00000363293 82 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 RNA5SP99-201ENST00000364020 114 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 SNORD115-17-201ENST00000364612 82 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 SNORD116-21-201ENST00000384507 92 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 RNU6-880P-201ENST00000384526 107 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 MT-TF-201ENST00000387314 71 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC007012.1-201ENST00000567192 175 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC106800.4-201ENST00000614905 153 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC012676.2-201ENST00000619258 186 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC087741.2-201ENST00000619415 172 ntBASIC1.42□□□□□ -2.18
KDM1AO60341 AC008163.1-202ENST00000636004 2889 ntBASIC1.41□□□□□ -2.18
KDM1AO60341 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
KDM1AO60341 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
KDM1AO60341 AC063976.4-201ENST00000421971 163 ntBASIC1.41□□□□□ -2.18
KDM1AO60341 uc_338.6-201ENST00000613544 171 ntBASIC1.41□□□□□ -2.18
KDM1AO60341 MIR30D-201ENST00000362283 70 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 Y_RNA.362-201ENST00000365518 110 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 RNU7-79P-201ENST00000516082 62 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 MIR4679-2-201ENST00000578358 77 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 SNORA4-201ENST00000584302 138 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 MIR6129-201ENST00000616087 109 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
KDM1AO60341 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
KDM1AO60341 Y_RNA.140-201ENST00000363474 103 ntBASIC1.39□□□□□ -2.19
KDM1AO60341 RNY1P13-201ENST00000365030 105 ntBASIC1.39□□□□□ -2.19
KDM1AO60341 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.39□□□□□ -2.19
KDM1AO60341 AC019288.1-201ENST00000557918 224 ntBASIC1.39□□□□□ -2.19
KDM1AO60341 FAM71BP1-201ENST00000604431 523 ntBASIC1.39□□□□□ -2.19
KDM1AO60341 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KDM1AO60341 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 Y_RNA.344-201ENST00000365381 112 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 RNU6-949P-201ENST00000384040 107 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 RNU6-616P-201ENST00000384353 107 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 MIR18B-201ENST00000454574 71 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 MIR4303-201ENST00000581299 66 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 AL035470.1-201ENST00000622571 220 ntBASIC1.38□□□□□ -2.19
KDM1AO60341 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.38□□□□□ -2.19
KDM1AO60341 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KDM1AO60341 Y_RNA.35-201ENST00000362601 101 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 RNU6-429P-201ENST00000384582 108 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 RPL39P25-201ENST00000449384 154 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 SNORD67.1-201ENST00000516618 108 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 RNU6-94P-201ENST00000607728 107 ntBASIC1.37□□□□□ -2.19
KDM1AO60341 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 Y_RNA.549-201ENST00000384657 102 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
KDM1AO60341 snoU13.21-201ENST00000459368 105 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 RNU7-137P-201ENST00000516788 62 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.36□□□□□ -2.19
KDM1AO60341 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.36□□□□□ -2.19
KDM1AO60341 MIR4781-201ENST00000585250 76 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 Y_RNA.773-201ENST00000607168 90 ntBASIC1.36□□□□□ -2.19
KDM1AO60341 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KDM1AO60341 Y_RNA.281-201ENST00000364774 94 ntBASIC1.35□□□□□ -2.19
KDM1AO60341 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
KDM1AO60341 RNU6-994P-201ENST00000410507 111 ntBASIC1.35□□□□□ -2.19
KDM1AO60341 SNORD83.1-201ENST00000411362 77 ntBASIC1.35□□□□□ -2.19
KDM1AO60341 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.35□□□□□ -2.19
KDM1AO60341 AL589743.1-201ENST00000551932 2712 ntBASIC1.35□□□□□ -2.19
KDM1AO60341 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KDM1AO60341 SNORD114-10-201ENST00000363409 72 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RNU6-1325P-201ENST00000364905 105 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RPL39P34-201ENST00000477141 156 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RNU6-412P-201ENST00000516434 106 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 RNU6-589P-201ENST00000516485 107 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 MIR3124-201ENST00000582636 67 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 MIR1255B1-201ENST00000636325 63 ntBASIC1.34□□□□□ -2.19
KDM1AO60341 SNORA63.5-201ENST00000363548 123 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 RNU6-934P-201ENST00000365154 107 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 MIR206-201ENST00000384872 86 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 RNU7-2P-201ENST00000516096 62 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 AL162726.3-218ENST00000636401 95 ntBASIC1.33□□□□□ -2.2
KDM1AO60341 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KDM1AO60341 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KDM1AO60341 Y_RNA.85-201ENST00000363014 111 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 Y_RNA.309-201ENST00000365046 111 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 RNU6-215P-201ENST00000365169 102 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 U8.15-201ENST00000390947 134 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 MIR1912-201ENST00000410389 80 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 RNU7-95P-201ENST00000459222 64 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms