Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-588P-201ENST00000410281 105 ntBASIC0.68□□□□□ -2.3
SSX4O60224 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
SSX4O60224 Y_RNA.662-201ENST00000516028 97 ntBASIC0.68□□□□□ -2.3
SSX4O60224 SNORA81.3-201ENST00000517283 198 ntBASIC0.68□□□□□ -2.3
SSX4O60224 MIR3646-201ENST00000578301 84 ntBASIC0.68□□□□□ -2.3
SSX4O60224 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
SSX4O60224 Y_RNA.497-201ENST00000384447 98 ntBASIC0.67□□□□□ -2.3
SSX4O60224 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.67□□□□□ -2.3
SSX4O60224 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
SSX4O60224 RNU6-893P-201ENST00000458841 100 ntBASIC0.67□□□□□ -2.3
SSX4O60224 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
SSX4O60224 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
SSX4O60224 AC004792.1-201ENST00000614523 137 ntBASIC0.67□□□□□ -2.3
SSX4O60224 MIR3658-201ENST00000636291 56 ntBASIC0.67□□□□□ -2.3
SSX4O60224 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SSX4O60224 RNU6-349P-201ENST00000362402 107 ntBASIC0.66□□□□□ -2.3
SSX4O60224 Y_RNA.205-201ENST00000364128 113 ntBASIC0.66□□□□□ -2.3
SSX4O60224 Y_RNA.785-201ENST00000384290 109 ntBASIC0.66□□□□□ -2.3
SSX4O60224 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
SSX4O60224 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
SSX4O60224 RNU6-1258P-201ENST00000516911 111 ntBASIC0.66□□□□□ -2.3
SSX4O60224 RNU7-156P-201ENST00000517214 74 ntBASIC0.66□□□□□ -2.3
SSX4O60224 RN7SL793P-201ENST00000583259 296 ntBASIC0.66□□□□□ -2.3
SSX4O60224 DNAJC19P2-201ENST00000593340 302 ntBASIC0.66□□□□□ -2.3
SSX4O60224 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.3
SSX4O60224 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SSX4O60224 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-1318P-201ENST00000365389 103 ntBASIC0.65□□□□□ -2.31
SSX4O60224 Y_RNA.441-201ENST00000384123 112 ntBASIC0.65□□□□□ -2.31
SSX4O60224 SNORA18-201ENST00000384416 132 ntBASIC0.65□□□□□ -2.31
SSX4O60224 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
SSX4O60224 SNORD37.2-201ENST00000391075 66 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-447P-201ENST00000410293 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-1118P-201ENST00000410382 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-1076P-201ENST00000410397 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-355P-201ENST00000410427 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-791P-201ENST00000410467 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-705P-201ENST00000410601 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-1100P-201ENST00000410691 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-860P-201ENST00000410860 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-1217P-201ENST00000411276 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU6-785P-201ENST00000411324 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RPL39P25-201ENST00000449384 154 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNU7-102P-201ENST00000458948 62 ntBASIC0.65□□□□□ -2.31
SSX4O60224 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
SSX4O60224 AC008608.1-201ENST00000603910 127 ntBASIC0.65□□□□□ -2.31
SSX4O60224 U6.90-201ENST00000614007 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 U6.70-201ENST00000620287 104 ntBASIC0.65□□□□□ -2.31
SSX4O60224 RNA5SP325-201ENST00000363756 130 ntBASIC0.64□□□□□ -2.31
SSX4O60224 Y_RNA.171-201ENST00000363760 102 ntBASIC0.64□□□□□ -2.31
SSX4O60224 SNORD93-201ENST00000408813 74 ntBASIC0.64□□□□□ -2.31
SSX4O60224 RNA5SP144-201ENST00000410846 116 ntBASIC0.64□□□□□ -2.31
SSX4O60224 RNU2-60P-201ENST00000517290 128 ntBASIC0.64□□□□□ -2.31
SSX4O60224 SNORD92-201ENST00000585078 85 ntBASIC0.64□□□□□ -2.31
SSX4O60224 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
SSX4O60224 RNY1P11-201ENST00000363759 113 ntBASIC0.63□□□□□ -2.31
SSX4O60224 RNU6-690P-201ENST00000365242 106 ntBASIC0.63□□□□□ -2.31
SSX4O60224 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
SSX4O60224 MTATP6P21-201ENST00000440681 189 ntBASIC0.63□□□□□ -2.31
SSX4O60224 AC074198.2-201ENST00000508153 258 ntBASIC0.63□□□□□ -2.31
SSX4O60224 MIR3612-201ENST00000579753 87 ntBASIC0.63□□□□□ -2.31
SSX4O60224 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
SSX4O60224 Y_RNA.272-201ENST00000364696 102 ntBASIC0.62□□□□□ -2.31
SSX4O60224 U8.15-201ENST00000390947 134 ntBASIC0.62□□□□□ -2.31
SSX4O60224 RNU6-1135P-201ENST00000411083 103 ntBASIC0.62□□□□□ -2.31
SSX4O60224 AC090897.1-201ENST00000580909 226 ntBASIC0.62□□□□□ -2.31
SSX4O60224 AC011603.4-201ENST00000611325 277 ntBASIC0.62□□□□□ -2.31
SSX4O60224 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
SSX4O60224 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
SSX4O60224 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
SSX4O60224 Y_RNA.584-201ENST00000391090 114 ntBASIC0.61□□□□□ -2.31
SSX4O60224 RNU4-83P-201ENST00000410863 133 ntBASIC0.61□□□□□ -2.31
SSX4O60224 AL022718.1-201ENST00000412004 84 ntBASIC0.61□□□□□ -2.31
SSX4O60224 RNU7-113P-201ENST00000459273 62 ntBASIC0.61□□□□□ -2.31
SSX4O60224 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.61□□□□□ -2.31
SSX4O60224 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SSX4O60224 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
SSX4O60224 RNU6-949P-201ENST00000384040 107 ntBASIC0.6□□□□□ -2.31
SSX4O60224 Y_RNA.470-201ENST00000384307 117 ntBASIC0.6□□□□□ -2.31
SSX4O60224 RNU6-240P-201ENST00000516098 97 ntBASIC0.6□□□□□ -2.31
SSX4O60224 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
SSX4O60224 RNU6-508P-201ENST00000363231 103 ntBASIC0.59□□□□□ -2.31
SSX4O60224 RNY1P13-201ENST00000365030 105 ntBASIC0.59□□□□□ -2.31
SSX4O60224 SNORD18B-201ENST00000365659 72 ntBASIC0.59□□□□□ -2.31
SSX4O60224 AL512326.2-201ENST00000426359 151 ntBASIC0.59□□□□□ -2.31
SSX4O60224 RNU6-182P-201ENST00000516970 105 ntBASIC0.59□□□□□ -2.31
SSX4O60224 AC004812.1-201ENST00000540773 146 ntBASIC0.59□□□□□ -2.31
SSX4O60224 AC112693.2-201ENST00000556538 232 ntBASIC0.59□□□□□ -2.31
SSX4O60224 MIR4305-201ENST00000583252 102 ntBASIC0.59□□□□□ -2.31
SSX4O60224 MIR8066-201ENST00000617280 78 ntBASIC0.59□□□□□ -2.31
SSX4O60224 Y_RNA.42-201ENST00000362660 108 ntBASIC0.58□□□□□ -2.32
SSX4O60224 RNU6-403P-201ENST00000363163 104 ntBASIC0.58□□□□□ -2.32
SSX4O60224 Y_RNA.120-201ENST00000363304 110 ntBASIC0.58□□□□□ -2.32
SSX4O60224 Y_RNA.251-201ENST00000364551 99 ntBASIC0.58□□□□□ -2.32
SSX4O60224 RNU4-11P-201ENST00000365287 132 ntBASIC0.58□□□□□ -2.32
SSX4O60224 SNORD100-201ENST00000408573 76 ntBASIC0.58□□□□□ -2.32
SSX4O60224 RNU6-1086P-201ENST00000410930 100 ntBASIC0.58□□□□□ -2.32
SSX4O60224 AC096949.1-201ENST00000412047 152 ntBASIC0.58□□□□□ -2.32
SSX4O60224 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
SSX4O60224 RNU7-79P-201ENST00000516082 62 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms