Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 Y_RNA.596-201ENST00000410462 109 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 AC245517.4-201ENST00000448601 281 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 AC121758.2-201ENST00000553271 193 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ACTN4O43707 Y_RNA.386-201ENST00000383913 105 ntBASIC2.86□□□□□ -1.95
ACTN4O43707 MIR563-201ENST00000385080 79 ntBASIC2.86□□□□□ -1.95
ACTN4O43707 MIR653-201ENST00000385279 96 ntBASIC2.86□□□□□ -1.95
ACTN4O43707 COTL1P1-201ENST00000422309 375 ntBASIC2.86□□□□□ -1.95
ACTN4O43707 SNORD111.1-201ENST00000516421 86 ntBASIC2.86□□□□□ -1.95
ACTN4O43707 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ACTN4O43707 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ACTN4O43707 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ACTN4O43707 MIRLET7F1-201ENST00000362202 87 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 RNU6-203P-201ENST00000384038 104 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 RNA5SP100-201ENST00000410903 110 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 RNA5SP59-201ENST00000410922 110 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 SNORA59A-201ENST00000459326 152 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 MIR6740-201ENST00000618268 113 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 AC006386.2-201ENST00000624491 75 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 AC012005.1-201ENST00000624575 75 ntBASIC2.85□□□□□ -1.95
ACTN4O43707 Y_RNA.12-201ENST00000362393 112 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 Y_RNA.205-201ENST00000364128 113 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ACTN4O43707 AC074348.1-201ENST00000426503 132 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 SNORD109B-201ENST00000458961 67 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 SNORD109A-201ENST00000459128 67 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 SNORA31.17-201ENST00000516953 127 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 MIR4513-201ENST00000581077 86 ntBASIC2.84□□□□□ -1.95
ACTN4O43707 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
ACTN4O43707 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ACTN4O43707 MIR30D-201ENST00000362283 70 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 RNU6-396P-201ENST00000365369 105 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 RNU6-800P-201ENST00000384473 103 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 RNU6-540P-201ENST00000384622 101 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 EIF4BP1-201ENST00000554881 351 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 GTF3AP2-201ENST00000557014 266 ntBASIC2.83□□□□□ -1.96
ACTN4O43707 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
ACTN4O43707 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ACTN4O43707 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ACTN4O43707 RNU6-1165P-201ENST00000410119 107 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 AC004965.1-201ENST00000413033 213 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 YWHAEP2-201ENST00000580066 112 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 YWHAEP3-201ENST00000582767 121 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 AC010297.1-201ENST00000623948 149 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 FO624990.1-201ENST00000636373 85 ntBASIC2.82□□□□□ -1.96
ACTN4O43707 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ACTN4O43707 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 MIR6073-201ENST00000352083 89 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 RNA5SP456-201ENST00000364002 114 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 SNORA8.1-201ENST00000384250 140 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 MIR154-201ENST00000385243 84 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 MIR518E-201ENST00000385252 88 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 RNU7-106P-201ENST00000459514 67 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 MIR4264-201ENST00000583520 66 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 U6.111-201ENST00000636093 83 ntBASIC2.81□□□□□ -1.96
ACTN4O43707 RNU6-957P-201ENST00000363652 99 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 RNU6-1241P-201ENST00000384536 107 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 SNORA11.2-201ENST00000408318 127 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 AP000942.3-201ENST00000603702 160 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 MIR7106-201ENST00000612419 65 ntBASIC2.8□□□□□ -1.96
ACTN4O43707 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
ACTN4O43707 SNORA80A-201ENST00000363922 136 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 RNU6-53P-201ENST00000365367 106 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 RNA5SP259-201ENST00000365541 109 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 SNORD90-201ENST00000391145 111 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 RNA5SP320-201ENST00000516263 124 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 RNU6-531P-201ENST00000516694 104 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.79□□□□□ -1.96
ACTN4O43707 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ACTN4O43707 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ACTN4O43707 MIR194-1-201ENST00000384892 85 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 RNU6-205P-201ENST00000390858 107 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 SNORD63B-201ENST00000411005 70 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 AC108938.1-201ENST00000451204 136 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 RNU7-62P-201ENST00000458856 62 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 MIR3192-201ENST00000584920 77 ntBASIC2.78□□□□□ -1.96
ACTN4O43707 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 RNU4-58P-201ENST00000363192 141 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 MIR27B-201ENST00000385129 97 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 MT-TF-201ENST00000387314 71 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 RNU6-663P-201ENST00000391105 106 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 MIR1302-7-201ENST00000408841 72 ntBASIC2.77□□□□□ -1.97
ACTN4O43707 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 270 ms