Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU7-43P-201ENST00000516554 64 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.42□□□□□ -2.18
SMAD6O43541 MIR4764-201ENST00000580680 88 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 MIR8055-201ENST00000610739 97 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 Y_RNA.818-201ENST00000618813 71 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMAD6O43541 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMAD6O43541 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNU4-67P-201ENST00000364569 141 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 SNORA1.1-201ENST00000364671 133 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 MIR520C-201ENST00000385005 87 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 MIR605-201ENST00000385078 83 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNY4P29-201ENST00000410801 97 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RPS3AP1-201ENST00000413190 320 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 AL353813.1-201ENST00000440700 253 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 DEFB131E-201ENST00000532329 154 ntBASIC1.41□□□□□ -2.18
SMAD6O43541 RNY3P2-201ENST00000362918 102 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-1099P-201ENST00000363533 107 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 Y_RNA.360-201ENST00000365512 102 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-409P-201ENST00000384114 104 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MIR653-201ENST00000385279 96 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORD77B-201ENST00000391112 67 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 SNORA7.5-201ENST00000410672 110 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNU6-733P-201ENST00000410759 104 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MTATP8P2-201ENST00000435212 202 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
SMAD6O43541 AC062037.1-201ENST00000605302 128 ntBASIC1.4□□□□□ -2.19
SMAD6O43541 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU4-36P-201ENST00000364294 144 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-342P-201ENST00000384521 104 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR577-201ENST00000385196 96 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-679P-201ENST00000391003 106 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR1302-4-201ENST00000408701 150 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 AC090844.1-201ENST00000422019 156 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.39□□□□□ -2.19
SMAD6O43541 RNU7-41P-201ENST00000515917 61 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-158P-201ENST00000517104 100 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR548AO-201ENST00000579992 96 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 Z97988.1-201ENST00000637697 135 ntBASIC1.39□□□□□ -2.19
SMAD6O43541 Y_RNA.107-201ENST00000363190 121 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-832P-201ENST00000363319 107 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.38□□□□□ -2.19
SMAD6O43541 AC245047.7-201ENST00000440265 293 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-322P-201ENST00000516010 103 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 SCARNA23-201ENST00000516060 130 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-521P-201ENST00000516663 105 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 RNU6-844P-201ENST00000517175 102 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 MIR4694-201ENST00000578534 80 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 FAM71BP1-201ENST00000604431 523 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 MIR4251-201ENST00000635819 61 ntBASIC1.38□□□□□ -2.19
SMAD6O43541 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SMAD6O43541 Y_RNA.93-201ENST00000363066 109 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.342-201ENST00000365352 113 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 SNORA18-201ENST00000384416 132 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.601-201ENST00000410500 113 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-602P-201ENST00000411155 105 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-592P-201ENST00000411333 103 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 MIR548Z-201ENST00000584743 97 ntBASIC1.37□□□□□ -2.19
SMAD6O43541 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SMAD6O43541 Y_RNA.466-201ENST00000384294 113 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORA26.2-201ENST00000390922 122 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU6-1053P-201ENST00000515930 101 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 RNU6-795P-201ENST00000516323 103 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 SNORA77B-201ENST00000578179 125 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 AL359821.1-201ENST00000605519 182 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 AL442128.1-201ENST00000615151 90 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MALAT1.1-201ENST00000618249 95 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MIR8063-201ENST00000621930 81 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 MIR2052-201ENST00000636055 55 ntBASIC1.36□□□□□ -2.19
SMAD6O43541 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SMAD6O43541 Y_RNA.10-201ENST00000362371 110 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNA5SP173-201ENST00000364857 136 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-573P-201ENST00000383938 106 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-1201P-201ENST00000384227 107 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNU7-35P-201ENST00000517174 62 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 AC012531.4-201ENST00000616509 177 ntBASIC1.35□□□□□ -2.19
SMAD6O43541 RNY1P10-201ENST00000363268 113 ntBASIC1.34□□□□□ -2.19
SMAD6O43541 Y_RNA.354-201ENST00000365448 111 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms