Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL049861.1-201ENST00000603130 150 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 AC021613.1-201ENST00000623880 111 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 SNORD115-19-201ENST00000363098 82 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 SNORD115-18-201ENST00000363293 82 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 SNORD115-23-201ENST00000364461 82 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 SNORD115-17-201ENST00000364612 82 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 SNORD115-20-201ENST00000365099 82 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.5□□□□□ -2.81
CHD1O14646 SNORD67.1-201ENST00000516618 108 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 MIR6773-201ENST00000612812 74 ntBASIC-2.5□□□□□ -2.81
CHD1O14646 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 SNORD115-33-201ENST00000363723 82 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 SNORA72.4-201ENST00000384174 132 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 MIR548E-201ENST00000408287 88 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 AC083904.1-201ENST00000487828 231 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 AC097510.1-201ENST00000510945 133 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 RNU6-208P-201ENST00000362431 107 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 SNORA26.4-201ENST00000391188 123 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 AC098826.2-201ENST00000452011 651 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 RNU7-70P-201ENST00000516941 66 ntBASIC-2.51□□□□□ -2.81
CHD1O14646 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.52□□□□□ -2.81
CHD1O14646 RNU6-95P-201ENST00000384697 107 ntBASIC-2.52□□□□□ -2.81
CHD1O14646 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.52□□□□□ -2.81
CHD1O14646 SNORD63.1-201ENST00000516178 80 ntBASIC-2.52□□□□□ -2.81
CHD1O14646 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.52□□□□□ -2.81
CHD1O14646 RNU6-194P-201ENST00000363862 105 ntBASIC-2.53□□□□□ -2.81
CHD1O14646 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.53□□□□□ -2.81
CHD1O14646 RNU6-261P-201ENST00000459506 102 ntBASIC-2.53□□□□□ -2.81
CHD1O14646 MIR6841-201ENST00000637129 72 ntBASIC-2.53□□□□□ -2.81
CHD1O14646 Y_RNA.66-201ENST00000362862 102 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 MIR487B-201ENST00000385021 84 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 RNU7-106P-201ENST00000459514 67 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 RNU6-746P-201ENST00000384112 109 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 Y_RNA.582-201ENST00000391023 95 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 MTND2P22-201ENST00000444325 1033 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 SNORD77.4-201ENST00000516158 81 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 ZNF519P2-201ENST00000557032 169 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 AP000240.1-201ENST00000609910 452 ntBASIC-2.54□□□□□ -2.82
CHD1O14646 Y_RNA.230-201ENST00000364348 109 ntBASIC-2.55□□□□□ -2.82
CHD1O14646 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.55□□□□□ -2.82
CHD1O14646 MIR3672-201ENST00000584290 82 ntBASIC-2.55□□□□□ -2.82
CHD1O14646 AL158211.2-201ENST00000607282 395 ntBASIC-2.55□□□□□ -2.82
CHD1O14646 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-2.55□□□□□ -2.82
CHD1O14646 RNU6-924P-201ENST00000362926 108 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-2.56□□□□□ -2.82
CHD1O14646 RNU1-54P-201ENST00000517181 120 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 AL022161.1-201ENST00000604390 213 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 RNU6-89P-201ENST00000606519 100 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 ELOCP20-201ENST00000422460 345 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-2.56□□□□□ -2.82
CHD1O14646 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.57□□□□□ -2.82
CHD1O14646 MIR548H3-201ENST00000408771 118 ntBASIC-2.57□□□□□ -2.82
CHD1O14646 AL365203.2-201ENST00000423444 196 ntBASIC-2.57□□□□□ -2.82
CHD1O14646 MIR548AB-201ENST00000584917 84 ntBASIC-2.57□□□□□ -2.82
CHD1O14646 AC005357.1-201ENST00000588399 301 ntBASIC-2.57□□□□□ -2.82
CHD1O14646 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.58□□□□□ -2.82
CHD1O14646 SNORD5.1-201ENST00000458800 75 ntBASIC-2.58□□□□□ -2.82
CHD1O14646 RNU7-48P-201ENST00000458875 63 ntBASIC-2.58□□□□□ -2.82
CHD1O14646 RNU7-113P-201ENST00000459273 62 ntBASIC-2.58□□□□□ -2.82
CHD1O14646 RNA5SP26-201ENST00000362406 119 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU6-1103P-201ENST00000384150 107 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU6-383P-201ENST00000410864 94 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.59□□□□□ -2.82
CHD1O14646 AP001542.1-201ENST00000591314 200 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU2-66P-201ENST00000410650 161 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU2-72P-201ENST00000411175 163 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 RNU7-137P-201ENST00000516788 62 ntBASIC-2.59□□□□□ -2.82
CHD1O14646 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.59□□□□□ -2.82
CHD1O14646 SNORD116-11-201ENST00000383882 92 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 AL590004.1-201ENST00000405321 300 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 AC083798.1-201ENST00000472671 131 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 AL021707.8-201ENST00000609428 183 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 AC099654.14-201ENST00000638599 341 ntBASIC-2.6□□□□□ -2.83
CHD1O14646 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.61□□□□□ -2.83
CHD1O14646 AP003461.1-201ENST00000528866 78 ntBASIC-2.61□□□□□ -2.83
CHD1O14646 MIR3913-1-201ENST00000577744 102 ntBASIC-2.61□□□□□ -2.83
CHD1O14646 RNU6-170P-201ENST00000362832 104 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 RNU6-899P-201ENST00000363947 107 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR582-201ENST00000365731 98 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 RNU6-906P-201ENST00000384700 70 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 RNU2-55P-201ENST00000411146 174 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.62□□□□□ -2.83
CHD1O14646 MIR4509-3-201ENST00000578671 94 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR5701-3-201ENST00000578890 82 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR4509-2-201ENST00000583920 94 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR5701-1-201ENST00000585138 82 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR5701-2-201ENST00000615634 82 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 MIR4509-1-201ENST00000618224 94 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms