Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-704P-201ENST00000364162 103 ntBASIC0.79□□□□□ -2.28
CDX4O14627 SNORA1.1-201ENST00000364671 133 ntBASIC0.79□□□□□ -2.28
CDX4O14627 Y_RNA.330-201ENST00000365230 109 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-690P-201ENST00000365242 106 ntBASIC0.79□□□□□ -2.28
CDX4O14627 SNORA40-201ENST00000388090 126 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-1319P-201ENST00000390855 104 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-747P-201ENST00000390928 104 ntBASIC0.79□□□□□ -2.28
CDX4O14627 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
CDX4O14627 Y_RNA.586-201ENST00000391146 98 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-241P-201ENST00000391148 104 ntBASIC0.79□□□□□ -2.28
CDX4O14627 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNA5SP95-201ENST00000410319 137 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-177P-201ENST00000411257 104 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AC244023.1-201ENST00000426884 112 ntBASIC0.79□□□□□ -2.28
CDX4O14627 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AC242498.1-201ENST00000604134 111 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AC011603.4-201ENST00000611325 277 ntBASIC0.79□□□□□ -2.28
CDX4O14627 Z97988.1-201ENST00000637697 135 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AC008163.1-202ENST00000636004 2889 ntBASIC0.79□□□□□ -2.28
CDX4O14627 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
CDX4O14627 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
CDX4O14627 Y_RNA.366-201ENST00000365540 102 ntBASIC0.78□□□□□ -2.28
CDX4O14627 RNA5SP193-201ENST00000410353 107 ntBASIC0.78□□□□□ -2.28
CDX4O14627 RNU6-1211P-201ENST00000459179 105 ntBASIC0.78□□□□□ -2.28
CDX4O14627 RNU6-971P-201ENST00000516920 106 ntBASIC0.78□□□□□ -2.28
CDX4O14627 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.78□□□□□ -2.28
CDX4O14627 U7.2-201ENST00000607576 63 ntBASIC0.78□□□□□ -2.28
CDX4O14627 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
CDX4O14627 RNU6-235P-201ENST00000362644 107 ntBASIC0.77□□□□□ -2.29
CDX4O14627 Y_RNA.68-201ENST00000362881 102 ntBASIC0.77□□□□□ -2.29
CDX4O14627 Y_RNA.171-201ENST00000363760 102 ntBASIC0.77□□□□□ -2.29
CDX4O14627 RNU6-396P-201ENST00000365369 105 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SNORD50.2-201ENST00000365465 70 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SNORD38B-201ENST00000384690 67 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SNORD12C-201ENST00000386307 89 ntBASIC0.77□□□□□ -2.29
CDX4O14627 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
CDX4O14627 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
CDX4O14627 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
CDX4O14627 RNU6-1258P-201ENST00000516911 111 ntBASIC0.77□□□□□ -2.29
CDX4O14627 IGKV1-22-201ENST00000524313 326 ntBASIC0.77□□□□□ -2.29
CDX4O14627 AC133485.4-201ENST00000561835 220 ntBASIC0.77□□□□□ -2.29
CDX4O14627 AC138907.4-201ENST00000570107 226 ntBASIC0.77□□□□□ -2.29
CDX4O14627 Y_RNA.757-201ENST00000578934 114 ntBASIC0.77□□□□□ -2.29
CDX4O14627 MIR3152-201ENST00000579801 74 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SEPT14P17-201ENST00000617978 177 ntBASIC0.77□□□□□ -2.29
CDX4O14627 TUG1_4.1-201ENST00000619464 181 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SNORD38B-202ENST00000625943 69 ntBASIC0.77□□□□□ -2.29
CDX4O14627 SNORA22.1-201ENST00000362701 134 ntBASIC0.76□□□□□ -2.29
CDX4O14627 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
CDX4O14627 RNA5SP261-201ENST00000410536 106 ntBASIC0.76□□□□□ -2.29
CDX4O14627 RNA5SP144-201ENST00000410846 116 ntBASIC0.76□□□□□ -2.29
CDX4O14627 AL512326.2-201ENST00000426359 151 ntBASIC0.76□□□□□ -2.29
CDX4O14627 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
CDX4O14627 AL158147.1-201ENST00000443970 75 ntBASIC0.76□□□□□ -2.29
CDX4O14627 RNU2-35P-201ENST00000516446 142 ntBASIC0.76□□□□□ -2.29
CDX4O14627 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
CDX4O14627 AC023827.1-201ENST00000569247 97 ntBASIC0.76□□□□□ -2.29
CDX4O14627 MIR4305-201ENST00000583252 102 ntBASIC0.76□□□□□ -2.29
CDX4O14627 AC021443.1-201ENST00000604478 211 ntBASIC0.76□□□□□ -2.29
CDX4O14627 AL109933.3-201ENST00000619095 188 ntBASIC0.76□□□□□ -2.29
CDX4O14627 MIR6841-201ENST00000637129 72 ntBASIC0.76□□□□□ -2.29
CDX4O14627 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CDX4O14627 Y_RNA.280-201ENST00000364765 112 ntBASIC0.75□□□□□ -2.29
CDX4O14627 Y_RNA.430-201ENST00000384081 110 ntBASIC0.75□□□□□ -2.29
CDX4O14627 MIR942-201ENST00000401111 86 ntBASIC0.75□□□□□ -2.29
CDX4O14627 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
CDX4O14627 RNU7-164P-201ENST00000459221 62 ntBASIC0.75□□□□□ -2.29
CDX4O14627 RN7SKP19-201ENST00000516016 252 ntBASIC0.75□□□□□ -2.29
CDX4O14627 RNU6-1234P-201ENST00000516877 103 ntBASIC0.75□□□□□ -2.29
CDX4O14627 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
CDX4O14627 AL137067.1-201ENST00000615933 120 ntBASIC0.75□□□□□ -2.29
CDX4O14627 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDX4O14627 Y_RNA.470-201ENST00000384307 117 ntBASIC0.74□□□□□ -2.29
CDX4O14627 Y_RNA.525-201ENST00000384570 113 ntBASIC0.74□□□□□ -2.29
CDX4O14627 SNORA2B-201ENST00000384583 137 ntBASIC0.74□□□□□ -2.29
CDX4O14627 RNU6-1237P-201ENST00000384777 107 ntBASIC0.74□□□□□ -2.29
CDX4O14627 RNU6-613P-201ENST00000410412 108 ntBASIC0.74□□□□□ -2.29
CDX4O14627 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
CDX4O14627 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
CDX4O14627 RNU6-781P-201ENST00000516377 101 ntBASIC0.74□□□□□ -2.29
CDX4O14627 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
CDX4O14627 AC036111.3-201ENST00000526389 112 ntBASIC0.74□□□□□ -2.29
CDX4O14627 MIR3910-1-201ENST00000580936 111 ntBASIC0.74□□□□□ -2.29
CDX4O14627 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
CDX4O14627 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
CDX4O14627 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.74□□□□□ -2.29
CDX4O14627 MIR6740-201ENST00000618268 113 ntBASIC0.74□□□□□ -2.29
CDX4O14627 Y_RNA.218-201ENST00000364218 104 ntBASIC0.73□□□□□ -2.29
CDX4O14627 RNU6-647P-201ENST00000364243 107 ntBASIC0.73□□□□□ -2.29
CDX4O14627 Y_RNA.298-201ENST00000364960 107 ntBASIC0.73□□□□□ -2.29
CDX4O14627 MIR539-201ENST00000365690 78 ntBASIC0.73□□□□□ -2.29
CDX4O14627 MIR588-201ENST00000384900 83 ntBASIC0.73□□□□□ -2.29
CDX4O14627 MIR1263-201ENST00000408324 86 ntBASIC0.73□□□□□ -2.29
CDX4O14627 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
CDX4O14627 TMSB4XP3-201ENST00000445144 114 ntBASIC0.73□□□□□ -2.29
CDX4O14627 AC067940.1-201ENST00000458411 300 ntBASIC0.73□□□□□ -2.29
CDX4O14627 RNU7-107P-201ENST00000459121 61 ntBASIC0.73□□□□□ -2.29
CDX4O14627 snoU13.21-201ENST00000459368 105 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms