| CDK2AP1 | O14519 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | ZNF654-201 | ENST00000309495 | 4957 nt | APPRIS P2 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | TRAJ26-201 | ENST00000390511 | 60 nt | APPRIS P1 BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AC019288.1-201 | ENST00000557918 | 224 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AC138749.4-201 | ENST00000563970 | 127 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | FGF7-201 | ENST00000267843 | 5467 nt | APPRIS P1 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR449A-201 | ENST00000362113 | 91 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | Y_RNA.57-201 | ENST00000362806 | 113 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6-1296P-201 | ENST00000383879 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | TRAJ23-201 | ENST00000390514 | 63 nt | APPRIS P1 BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR1302-7-201 | ENST00000408841 | 72 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR4635-201 | ENST00000583759 | 79 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | SNORA4-201 | ENST00000584302 | 138 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | U6.109-201 | ENST00000636749 | 87 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | TRAJ39-201 | ENST00000390498 | 63 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR4264-201 | ENST00000583520 | 66 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | CERS6-AS1-202 | ENST00000594898 | 499 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | Y_RNA.119-201 | ENST00000363301 | 96 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR563-201 | ENST00000385080 | 79 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6-205P-201 | ENST00000390858 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR2115-201 | ENST00000516657 | 100 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIR6740-201 | ENST00000618268 | 113 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | UHMK1-204 | ENST00000545294 | 8117 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | MIPOL1-203 | ENST00000537471 | 5954 nt | APPRIS P1 TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | STX7-202 | ENST00000367941 | 15791 nt | APPRIS P1 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNA5SP133-201 | ENST00000363368 | 119 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6-301P-201 | ENST00000384277 | 107 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6ATAC3P-201 | ENST00000387974 | 126 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6-1165P-201 | ENST00000410119 | 107 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU4-83P-201 | ENST00000410863 | 133 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | RNU6-850P-201 | ENST00000516934 | 103 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | SNORA77B-201 | ENST00000578179 | 125 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| CDK2AP1 | O14519 | CENPE-201 | ENST00000265148 | 8612 nt | APPRIS P1 TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNA5SP210-201 | ENST00000391034 | 120 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR1236-201 | ENST00000408340 | 102 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | SNRPGP12-201 | ENST00000449481 | 213 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RN7SL429P-201 | ENST00000479090 | 223 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RN7SL489P-201 | ENST00000486185 | 223 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RN7SL327P-201 | ENST00000488659 | 223 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RN7SL274P-201 | ENST00000492268 | 272 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC024610.1-201 | ENST00000582685 | 323 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR8074-201 | ENST00000615081 | 81 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RN7SL853P-201 | ENST00000617250 | 223 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR30D-201 | ENST00000362283 | 70 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | TRAJ61-201 | ENST00000390479 | 60 nt | APPRIS P1 BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | HMGN2P38-201 | ENST00000423806 | 265 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | BX276092.1-201 | ENST00000427368 | 251 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC087499.7-201 | ENST00000441958 | 109 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU7-62P-201 | ENST00000458856 | 62 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | Y_RNA.94-201 | ENST00000363068 | 106 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU4-32P-201 | ENST00000363404 | 141 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU6-776P-201 | ENST00000364403 | 104 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU6-1022P-201 | ENST00000365049 | 104 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU6-571P-201 | ENST00000384128 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AL353795.2-201 | ENST00000431804 | 425 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | SNORD4B-201 | ENST00000459083 | 72 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC023790.1-201 | ENST00000482174 | 347 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU7-153P-201 | ENST00000516455 | 62 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR4287-201 | ENST00000579398 | 78 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AL512598.1-201 | ENST00000610158 | 273 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | ZNRD1-AS1_1.6-201 | ENST00000610339 | 68 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MT-TN-201 | ENST00000387400 | 73 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | TRAJ1-201 | ENST00000390536 | 62 nt | APPRIS P1 BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC074131.1-201 | ENST00000514662 | 253 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC140658.3-201 | ENST00000567603 | 271 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | SAGE1-201 | ENST00000324447 | 2952 nt | APPRIS P2 TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | SNORA16B-201 | ENST00000364674 | 135 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | RNA5SP126-201 | ENST00000365092 | 109 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | snoU13.25-201 | ENST00000458945 | 104 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | MIR6516-201 | ENST00000630554 | 81 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | OXR1-209 | ENST00000517566 | 4501 nt | TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CDK2AP1 | O14519 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |