Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC022559.1-201ENST00000520905 205 ntBASIC0.67□□□□□ -2.3
EIF3FO00303 AC011603.4-201ENST00000611325 277 ntBASIC0.67□□□□□ -2.3
EIF3FO00303 AC078938.1-201ENST00000620993 318 ntBASIC0.67□□□□□ -2.3
EIF3FO00303 RNU6-1082P-201ENST00000364574 107 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 Y_RNA.757-201ENST00000578934 114 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
EIF3FO00303 RNU6-349P-201ENST00000362402 107 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU4-84P-201ENST00000364200 139 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 Y_RNA.240-201ENST00000364469 95 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU6-1318P-201ENST00000365389 103 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 SNORA18-201ENST00000384416 132 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNA5SP144-201ENST00000410846 116 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU4-83P-201ENST00000410863 133 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU6-1086P-201ENST00000410930 100 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 AL022718.1-201ENST00000412004 84 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU6-388P-201ENST00000517012 105 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 RNU6-389P-201ENST00000517048 105 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 AC008608.1-201ENST00000603910 127 ntBASIC0.65□□□□□ -2.31
EIF3FO00303 Y_RNA.118-201ENST00000363300 101 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 RNU7-120P-201ENST00000459334 63 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 RNU7-121P-201ENST00000516604 62 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 AP003327.1-201ENST00000529684 127 ntBASIC0.64□□□□□ -2.31
EIF3FO00303 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
EIF3FO00303 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
EIF3FO00303 Y_RNA.29-201ENST00000362570 113 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 U8.15-201ENST00000390947 134 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 RNU6-138P-201ENST00000515952 107 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 DNAJC19P2-201ENST00000593340 302 ntBASIC0.62□□□□□ -2.31
EIF3FO00303 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 RNU6-690P-201ENST00000365242 106 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 RNA5SP117-201ENST00000365294 118 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 Y_RNA.497-201ENST00000384447 98 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 RNU6-1135P-201ENST00000411083 103 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 RNU7-113P-201ENST00000459273 62 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 Y_RNA.662-201ENST00000516028 97 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 RNU6-765P-201ENST00000516916 99 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
EIF3FO00303 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
EIF3FO00303 SNORD115-2-201ENST00000362842 82 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 SNORD115-20-201ENST00000365099 82 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 Y_RNA.441-201ENST00000384123 112 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 RNU6-342P-201ENST00000384521 104 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 MIR489-201ENST00000384923 84 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 SNORD37.2-201ENST00000391075 66 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
EIF3FO00303 Y_RNA.171-201ENST00000363760 102 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 Y_RNA.257-201ENST00000364596 102 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 RNY1P13-201ENST00000365030 105 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 SNORD18B-201ENST00000365659 72 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 Y_RNA.785-201ENST00000384290 109 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 RNU6-588P-201ENST00000410281 105 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 RNU6-1258P-201ENST00000516911 111 ntBASIC0.59□□□□□ -2.31
EIF3FO00303 RNU6-403P-201ENST00000363163 104 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 RNU6-861P-201ENST00000516745 106 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 RNU7-35P-201ENST00000517174 62 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 SNORA81.3-201ENST00000517283 198 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 MIR4305-201ENST00000583252 102 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 MIR6082-201ENST00000613604 109 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 MIR6515-201ENST00000619843 57 ntBASIC0.58□□□□□ -2.32
EIF3FO00303 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
EIF3FO00303 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
EIF3FO00303 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 Y_RNA.584-201ENST00000391090 114 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 Y_RNA.588-201ENST00000391254 102 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 RNU7-79P-201ENST00000516082 62 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.57□□□□□ -2.32
EIF3FO00303 MIR4491-201ENST00000581087 68 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 AC092634.7-201ENST00000621022 103 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 uc_338.16-201ENST00000621804 95 ntBASIC0.57□□□□□ -2.32
EIF3FO00303 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 Y_RNA.120-201ENST00000363304 110 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 RNU6-682P-201ENST00000363843 106 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 RNA5SP33-201ENST00000516687 98 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 AC133485.4-201ENST00000561835 220 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 AC138907.4-201ENST00000570107 226 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 MIR7111-201ENST00000619751 72 ntBASIC0.56□□□□□ -2.32
EIF3FO00303 AC096949.1-201ENST00000412047 152 ntBASIC0.55□□□□□ -2.32
EIF3FO00303 RNU6-469P-201ENST00000516253 101 ntBASIC0.55□□□□□ -2.32
EIF3FO00303 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
EIF3FO00303 Y_RNA.470-201ENST00000384307 117 ntBASIC0.54□□□□□ -2.32
EIF3FO00303 Y_RNA.531-201ENST00000384589 121 ntBASIC0.54□□□□□ -2.32
EIF3FO00303 RNU2-60P-201ENST00000517290 128 ntBASIC0.54□□□□□ -2.32
EIF3FO00303 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms